RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-222	ENST00000613916	DRAP1	Q14919	205 aa	Predicted RBP	7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	PCBP1	Q15365	356 aa	Known RBP eCLIP	7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	AAK1	Q2M2I8	961 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	TRIM71	Q2Q1W2	868 aa	Known RBP	7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	SLC10A6	Q3KNW5	377 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	SFMBT2	Q5VUG0	894 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	TAF2	Q6P1X5	1199 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	RNF180	Q86T96	592 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	EFCAB13	Q8IY85	973 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	THNSL1	Q8IYQ7	743 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	ZNF710	Q8N1W2	664 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	SLC43A3	Q8NBI5	491 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	FBXL13	Q8NEE6	735 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	HELQ	Q8TDG4	1101 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	ATRIP	Q8WXE1	791 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	DHX38	Q92620	1227 aa	Known RBP	7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	KAT5	Q92993	513 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	TATDN2	Q93075	761 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	ELMO3	Q96BJ8	720 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	PPP1R13B	Q96KQ4	1090 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	KREMEN1	Q96MU8	473 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	SCLT1	Q96NL6	688 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	DESI2	Q9BSY9	194 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	STK33	Q9BYT3	514 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	CELF4	Q9BZC1	486 aa	Known RBP	7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	OSBPL7	Q9BZF2	842 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	NUCKS1	Q9H1E3	243 aa	Known RBP	7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	TSPYL2	Q9H2G4	693 aa	Predicted RBP	7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	EPHX3	Q9H6B9	360 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	TRMT1	Q9NXH9	659 aa	Known RBP	7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	TBX21	Q9UL17	535 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	GINS2	Q9Y248	185 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	PPP2R2C	Q9Y2T4	447 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	DAAM1	Q9Y4D1	1078 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	CDY2A	Q9Y6F7	541 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	EPN1	Q9Y6I3	576 aa	Predicted RBP	7.92	□□□□□ -1.14
PVT1-222	ENST00000613916	WDFY4	Q6ZS81	3184 aa		7.92	□□□□□ -1.14
PVT1-222	ENST00000613916		A0A1W2PQ45	241 aa	Predicted RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916		A0A1W2PQY0	241 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	SSU72P8	A0A1W2PR75	194 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	MOXD2P	A6NHM9	499 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	LACTBL1	A8MY62	500 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916		F8VZ95	297 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	PQBP1	O60828	265 aa	Known RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	ERLIN2	O94905	339 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	NDUFA10	O95299	355 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	LCA5L	O95447	670 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	TIMP1	P01033	207 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	MYCN	P04198	464 aa	Predicted RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	CLTA	P09496	248 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	STAG3L1	P0CL83	205 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	CXCL8	P10145	99 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	TNNI1	P19237	187 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	AXL	P30530	894 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	EIF4A3	P38919	411 aa	Known RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	GRM5	P41594	1212 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	PRKCI	P41743	596 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	OSTN	P61366	133 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	PTPN11	Q06124	597 aa	Predicted RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	RAPGEF1	Q13905	1077 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	SURF1	Q15526	300 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	RAB30	Q15771	203 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	TSR1	Q2NL82	804 aa	Known RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	FAM47C	Q5HY64	1035 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	TMEM240	Q5SV17	173 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	UBXN11	Q5T124	520 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	MFSD5	Q6N075	450 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	NYAP1	Q6ZVC0	841 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	C16orf59	Q7L2K0	433 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	CATSPER4	Q7RTX7	472 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	USP37	Q86T82	979 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	FAM228A	Q86W67	206 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	WDR49	Q8IV35	697 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	CCDC170	Q8IYT3	715 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	TMEM130	Q8N3G9	435 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	ACRBP	Q8NEB7	543 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	CXorf38	Q8TB03	319 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	FNBP1	Q96RU3	617 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	SYT11	Q9BT88	431 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	PI4K2A	Q9BTU6	479 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	EIF2A	Q9BY44	585 aa	Known RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	CXCL16	Q9H2A7	254 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	RPF1	Q9H9Y2	349 aa	Known RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	UBE2T	Q9NPD8	197 aa	Predicted RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	TMEM39A	Q9NV64	488 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	ZNHIT6	Q9NWK9	470 aa	Known RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	RAB20	Q9NX57	234 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	NOC2L	Q9Y3T9	749 aa	Known RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	TRPV2	Q9Y5S1	764 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	GBF1	Q92538	1859 aa		7.91	□□□□□ -1.14
PVT1-222	ENST00000613916	TTC3	P53804	2025 aa		7.9	□□□□□ -1.14
PVT1-222	ENST00000613916	TSC2	P49815	1807 aa		7.9	□□□□□ -1.14
PVT1-222	ENST00000613916	MROH7	Q68CQ1	1323 aa		7.9	□□□□□ -1.14
PVT1-222	ENST00000613916	RCCD1	A6NED2	376 aa		7.9	□□□□□ -1.14
PVT1-222	ENST00000613916	GRXCR1	A8MXD5	290 aa		7.9	□□□□□ -1.14
PVT1-222	ENST00000613916	EIF3CL	B5ME19	914 aa	Known RBP	7.9	□□□□□ -1.14
PVT1-222	ENST00000613916	FOXN3	O00409	490 aa	Predicted RBP	7.9	□□□□□ -1.14
PVT1-222	ENST00000613916	ZC3H11A	O75152	810 aa	Known RBP eCLIP	7.9	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms