RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 TRIM31Q9BZY9 425 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 DDX47Q9H0S4 455 aaKnown RBP17.62■□□□□ 0.41
CNOT3-208ENST00000613073 A8MUI8 341 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 ATG7O95352 703 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 GGPS1O95749 300 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 TNNC1P63316 161 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 CYP24A1Q07973 514 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 BRDTQ58F21 947 aaPredicted RBP17.61■□□□□ 0.41
CNOT3-208ENST00000613073 CDCA2Q69YH5 1023 aaPredicted RBP17.61■□□□□ 0.41
CNOT3-208ENST00000613073 RUFY4Q6ZNE9 571 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 SV2AQ7L0J3 742 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 GPD1LQ8N335 351 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 CHMP6Q96FZ7 201 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 SH3GL3Q99963 347 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 KDM4CQ9H3R0 1056 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 CEP104O60308 925 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 CNMDO75829 334 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 GLRA2P23416 452 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 MARK3P27448 753 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 ACOT2P49753 483 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 SLC47A2Q86VL8 602 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 SLC7A3Q8WY07 619 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 ZBTB45Q96K62 511 aaPredicted RBP17.61■□□□□ 0.41
CNOT3-208ENST00000613073 SYT17Q9BSW7 474 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 TMEM8AQ9HCN3 771 aa17.61■□□□□ 0.41
CNOT3-208ENST00000613073 SRRM3A6NNA2 597 aaPredicted RBP17.6■□□□□ 0.41
CNOT3-208ENST00000613073 KIF2BQ8N4N8 673 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 DHX38Q92620 1227 aaKnown RBP17.6■□□□□ 0.41
CNOT3-208ENST00000613073 MFSD14AQ96MC6 490 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 ELAC2Q9BQ52 826 aaKnown RBP17.6■□□□□ 0.41
CNOT3-208ENST00000613073 DPH5Q9H2P9 285 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 INTUQ9ULD6 942 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 AGAP1Q9UPQ3 857 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 KLHL33A6NCF5 533 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 DAPK3O43293 454 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 TCF7P36402 384 aaPredicted RBP17.6■□□□□ 0.41
CNOT3-208ENST00000613073 RTP1P59025 263 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 STRN3Q13033 797 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 DEPTORQ8TB45 409 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 KCNV2Q8TDN2 545 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 LRRC45Q96CN5 670 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 OPTNQ96CV9 577 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 FBXL18Q96ME1 805 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 ISCUQ9H1K1 167 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 PORCNQ9H237 461 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 DHX33Q9H6R0 707 aaKnown RBP17.6■□□□□ 0.41
CNOT3-208ENST00000613073 RAB20Q9NX57 234 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 RNF14Q9UBS8 474 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 STK38LQ9Y2H1 464 aa17.6■□□□□ 0.41
CNOT3-208ENST00000613073 A0A0A6YYK5 440 aaPredicted RBP17.59■□□□□ 0.41
CNOT3-208ENST00000613073 TLDC2A0PJX2 215 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 ARIH2O95376 493 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 CALCAP01258 141 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 FTLP02792 175 aaPredicted RBP17.59■□□□□ 0.41
CNOT3-208ENST00000613073 TMEM253P0C7T8 217 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 EDNRBP24530 442 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 STAT5BP51692 787 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 WNT7BP56706 349 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 EAPPQ56P03 285 aaPredicted RBP17.59■□□□□ 0.41
CNOT3-208ENST00000613073 LRIG3Q6UXM1 1119 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 NOP9Q86U38 636 aaKnown RBP17.59■□□□□ 0.41
CNOT3-208ENST00000613073 TRIM50Q86XT4 487 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 METTL13Q8N6R0 699 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 USP38Q8NB14 1042 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 FBXL13Q8NEE6 735 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 RFFLQ8WZ73 363 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 XPO6Q96QU8 1125 aaKnown RBP17.59■□□□□ 0.41
CNOT3-208ENST00000613073 ANKFY1Q9P2R3 1169 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 RBPJLQ9UBG7 517 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 SPDYE5A6NIY4 337 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 K7ERI5 159 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 IFNAR2P48551 515 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 NLRP11P59045 1033 aaKnown RBP17.59■□□□□ 0.41
CNOT3-208ENST00000613073 ADCY2Q08462 1091 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 BIRC3Q13489 604 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 PRPF4BQ13523 1007 aaKnown RBP17.59■□□□□ 0.41
CNOT3-208ENST00000613073 NT5DC3Q86UY8 548 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 C1orf131Q8NDD1 294 aaKnown RBP17.59■□□□□ 0.41
CNOT3-208ENST00000613073 ABCF3Q9NUQ8 709 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 COG5Q9UP83 839 aa17.59■□□□□ 0.41
CNOT3-208ENST00000613073 HARSP12081 509 aaKnown RBP17.58■□□□□ 0.41
CNOT3-208ENST00000613073 MFAP3P55082 362 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 SEZ6Q53EL9 994 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 ANKS4BQ8N8V4 417 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 C3orf20Q8ND61 904 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 HELQQ8TDG4 1101 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 EPS8L1Q8TE68 723 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 PCDHB18PQ96TA0 734 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 TARS2Q9BW92 718 aaKnown RBP17.58■□□□□ 0.41
CNOT3-208ENST00000613073 HAPLN2Q9GZV7 340 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 BATF3Q9NR55 127 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 NOP53Q9NZM5 478 aaKnown RBP17.58■□□□□ 0.41
CNOT3-208ENST00000613073 AGTPBP1Q9UPW5 1226 aa17.58■□□□□ 0.41
CNOT3-208ENST00000613073 MMEP08473 750 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 GHRP10912 638 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 GARTP22102 1010 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 DHX9Q08211 1270 aaKnown RBP17.58■□□□□ 0.4
CNOT3-208ENST00000613073 HSDL1Q3SXM5 330 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 ZBTB41Q5SVQ8 909 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 TMEM63BQ5T3F8 832 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms