RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TIAM2Q8IVF5 1701 aa9.22□□□□□ -0.93
LIG4-204ENST00000611712 EXTL3O43909 919 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 ARL4CP56559 192 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 CYP24A1Q07973 514 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 KCTD2Q14681 263 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 SUPT20HL1Q3ZLR7 823 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 SEZ6Q53EL9 994 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 TRPM8Q7Z2W7 1104 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 SPATA21Q7Z572 469 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 SLC9A9Q8IVB4 645 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 IL31RAQ8NI17 732 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 TMC2Q8TDI7 906 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 HEXIM2Q96MH2 286 aaKnown RBP9.21□□□□□ -0.93
LIG4-204ENST00000611712 MBOAT7Q96N66 472 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 RILPQ96NA2 401 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 TTC25Q96NG3 672 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 SENP7Q9BQF6 1050 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 ADPGKQ9BRR6 497 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 RPF1Q9H9Y2 349 aaKnown RBP9.21□□□□□ -0.93
LIG4-204ENST00000611712 C17orf75Q9HAS0 396 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 TXLNGQ9NUQ3 528 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 USP20Q9Y2K6 914 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 USP15Q9Y4E8 981 aaPredicted RBP9.21□□□□□ -0.93
LIG4-204ENST00000611712 MYH13Q9UKX3 1938 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 ANKRD63C9JTQ0 380 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 MAFGO15525 162 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 CALRP27797 417 aaKnown RBP9.21□□□□□ -0.93
LIG4-204ENST00000611712 ACTR2P61160 394 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 PSMC1P62191 440 aaKnown RBP9.21□□□□□ -0.93
LIG4-204ENST00000611712 NR1H3Q13133 447 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 CDO1Q16878 200 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 DUOXA2Q1HG44 320 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 ZNF568Q3ZCX4 644 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 PALB2Q86YC2 1186 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 C3orf20Q8ND61 904 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 MICAL1Q8TDZ2 1067 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 LENG9Q96B70 501 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 TSNARE1Q96NA8 513 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 FAM129AQ9BZQ8 928 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 MIS12Q9H081 205 aa9.21□□□□□ -0.93
LIG4-204ENST00000611712 AJAP1Q9UKB5 411 aaPredicted RBP9.21□□□□□ -0.93
LIG4-204ENST00000611712 NCANO14594 1321 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 MYO5AQ9Y4I1 1855 aaKnown RBP9.21□□□□□ -0.94
LIG4-204ENST00000611712 MAPK13O15264 365 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 TRAPPC3O43617 180 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 SHOX2O60902 331 aaPredicted RBP9.21□□□□□ -0.94
LIG4-204ENST00000611712 SPIRE1Q08AE8 756 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 PGM5Q15124 567 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 SLC15A2Q16348 729 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 SPDYE2Q495Y8 402 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 TRIM68Q6AZZ1 485 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 SPOPLQ6IQ16 392 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 ZNF280CQ8ND82 737 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 CCDC110Q8TBZ0 833 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 MCEEQ96PE7 176 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 MRPL4Q9BYD3 311 aaKnown RBP9.21□□□□□ -0.94
LIG4-204ENST00000611712 ECT2Q9H8V3 914 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 CYP26B1Q9NR63 512 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 AKT3Q9Y243 479 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 NEU2Q9Y3R4 380 aa9.21□□□□□ -0.94
LIG4-204ENST00000611712 MYH10P35580 1976 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 IGLV3-22A0A075B6J6 115 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 KIAA0391O15091 583 aaKnown RBP9.2□□□□□ -0.94
LIG4-204ENST00000611712 NPM3O75607 178 aaKnown RBP9.2□□□□□ -0.94
LIG4-204ENST00000611712 MYCNP04198 464 aaPredicted RBP9.2□□□□□ -0.94
LIG4-204ENST00000611712 SHBGP04278 402 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 STAT5BP51692 787 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 SLC8A3P57103 927 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 APBB1IPQ7Z5R6 666 aaPredicted RBP9.2□□□□□ -0.94
LIG4-204ENST00000611712 ZNF677Q86XU0 584 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 RHPN2Q8IUC4 686 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 ANKMY2Q8IV38 441 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 RCOR2Q8IZ40 523 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 PRELID2Q8N945 189 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 RNF149Q8NC42 400 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 AGBL3Q8NEM8 1001 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 RDM1Q8NG50 284 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 SREK1Q8WXA9 508 aaKnown RBP9.2□□□□□ -0.94
LIG4-204ENST00000611712 GPRASP2Q96D09 838 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 NEUROG2Q9H2A3 272 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 SIX2Q9NPC8 291 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 SYNPO2Q9UMS6 1093 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 PCDHA3Q9Y5H8 950 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 IVNS1ABPQ9Y6Y0 642 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 ROBO1Q9Y6N7 1651 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 CALCAP01258 141 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 ADRB2P07550 413 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 MAGEA4P43358 317 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 GPC3P51654 580 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 JAM2P57087 298 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 MTM1Q13496 603 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 TSNAXIP1Q2TAA8 658 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 SAMD7Q7Z3H4 446 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 LMNTD2Q8IXW0 634 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 MICALL2Q8IY33 904 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 SERPINB12Q96P63 405 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 DEFB129Q9H1M3 183 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 ETNK1Q9HBU6 452 aa9.2□□□□□ -0.94
LIG4-204ENST00000611712 NGRNQ9NPE2 291 aaKnown RBP9.2□□□□□ -0.94
LIG4-204ENST00000611712 PXMP2Q9NR77 195 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms