RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 ZNF507Q8TCN5 953 aa13.89□□□□□ -0.19
CD9-212ENST00000610354 UROC1Q96N76 676 aa13.89□□□□□ -0.19
CD9-212ENST00000610354 RPF1Q9H9Y2 349 aaKnown RBP13.89□□□□□ -0.19
CD9-212ENST00000610354 STK39Q9UEW8 545 aa13.89□□□□□ -0.19
CD9-212ENST00000610354 CDH22Q9UJ99 828 aa13.89□□□□□ -0.19
CD9-212ENST00000610354 AGO2Q9UKV8 859 aaKnown RBP13.89□□□□□ -0.19
CD9-212ENST00000610354 BDP1A6H8Y1 2624 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 PVALEFA0A1B0GWK0 134 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 PODXLO00592 558 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 B3GAT3O94766 335 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 URODP06132 367 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 FGFR3P22607 806 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 SYKP43405 635 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 CLCN4P51793 760 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 SMAD4Q13485 552 aaKnown RBP13.88□□□□□ -0.19
CD9-212ENST00000610354 ALCAMQ13740 583 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 KYAT1Q16773 422 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 FAM171A1Q5VUB5 890 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 JADE1Q6IE81 842 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 CEP57L1Q8IYX8 460 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 C12orf76Q8N812 135 aaPredicted RBP13.88□□□□□ -0.19
CD9-212ENST00000610354 LNX1Q8TBB1 728 aaPredicted RBP13.88□□□□□ -0.19
CD9-212ENST00000610354 SCFD1Q8WVM8 642 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 RIN2Q8WYP3 895 aaPredicted RBP13.88□□□□□ -0.19
CD9-212ENST00000610354 POMGNT1Q8WZA1 660 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 SAAL1Q96ER3 474 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 KIF12Q96FN5 646 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 UHRF1Q96T88 793 aaPredicted RBP13.88□□□□□ -0.19
CD9-212ENST00000610354 PYM1Q9BRP8 204 aaKnown RBP13.88□□□□□ -0.19
CD9-212ENST00000610354 CBWD1Q9BRT8 395 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 APOL5Q9BWW9 433 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 SLC38A7Q9NVC3 462 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 EXOC7Q9UPT5 735 aa13.88□□□□□ -0.19
CD9-212ENST00000610354 SF3B1O75533 1304 aaKnown RBP eCLIP13.87□□□□□ -0.19
CD9-212ENST00000610354 GOLGA8IPA6NC78 632 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 GOLGA8JA6NMD2 632 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 PPEF2O14830 753 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 ADAM12O43184 909 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 TGFB1I1O43294 461 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 NFICP08651 508 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 GARTP22102 1010 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 KLRC2P26717 231 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 LRPAP1P30533 357 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 PPP2R3AQ06190 1150 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 BMS1Q14692 1282 aaKnown RBP13.87□□□□□ -0.19
CD9-212ENST00000610354 SMAD2Q15796 467 aaKnown RBP13.87□□□□□ -0.19
CD9-212ENST00000610354 PUS10Q3MIT2 529 aaKnown RBP13.87□□□□□ -0.19
CD9-212ENST00000610354 SCARA3Q6AZY7 606 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 RSPO2Q6UXX9 243 aaPredicted RBP13.87□□□□□ -0.19
CD9-212ENST00000610354 KRBA2Q6ZNG9 492 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 GPR65Q8IYL9 337 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 PIK3R5Q8WYR1 880 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 SUSD6Q92537 303 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 CASP10Q92851 521 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 FAM212AQ96EL1 285 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
CD9-212ENST00000610354 CLSTN3Q9BQT9 956 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 TTPALQ9BTX7 342 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 EMILIN2Q9BXX0 1053 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 PCIF1Q9H4Z3 704 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 SLC39A2Q9NP94 309 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 FNIP2Q9P278 1114 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 USP25Q9UHP3 1055 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 USP15Q9Y4E8 981 aaPredicted RBP13.87□□□□□ -0.19
CD9-212ENST00000610354 C2orf16Q68DN1 1984 aa13.87□□□□□ -0.19
CD9-212ENST00000610354 DOCK6Q96HP0 2047 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 EIF3DO15371 548 aaKnown RBP eCLIP13.86□□□□□ -0.19
CD9-212ENST00000610354 ZNF202O95125 648 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 CYP3A5P20815 502 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 TKTP29401 623 aaKnown RBP13.86□□□□□ -0.19
CD9-212ENST00000610354 RPL9P32969 192 aaKnown RBP13.86□□□□□ -0.19
CD9-212ENST00000610354 STK4Q13043 487 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 POSTNQ15063 836 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 KMT5BQ4FZB7 885 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 SPATA1Q5VX52 437 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 KIAA1841Q6NSI8 718 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
CD9-212ENST00000610354 CEP57Q86XR8 500 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 GLYCTKQ8IVS8 523 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 EFCAB13Q8IY85 973 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 SYCP3Q8IZU3 236 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 KIAA0895Q8NCT3 520 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 ENGASEQ8NFI3 743 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 FAM84AQ96KN4 292 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 FBXL18Q96ME1 805 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 FAM213AQ9BRX8 229 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 TMEM206Q9H813 350 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 CIZ1Q9ULV3 898 aaPredicted RBP13.86□□□□□ -0.19
CD9-212ENST00000610354 UBQLN1Q9UMX0 589 aaKnown RBP13.86□□□□□ -0.19
CD9-212ENST00000610354 SSX2IPQ9Y2D8 614 aa13.86□□□□□ -0.19
CD9-212ENST00000610354 SPATA31D3P0C874 917 aa13.85□□□□□ -0.19
CD9-212ENST00000610354 POU5F1Q01860 360 aaKnown RBP13.85□□□□□ -0.19
CD9-212ENST00000610354 DPYDQ12882 1025 aa13.85□□□□□ -0.19
CD9-212ENST00000610354 ELAVL2Q12926 359 aaKnown RBP13.85□□□□□ -0.19
CD9-212ENST00000610354 SNW1Q13573 536 aaKnown RBP13.85□□□□□ -0.19
CD9-212ENST00000610354 BMT2Q1RMZ1 405 aa13.85□□□□□ -0.19
CD9-212ENST00000610354 SPATA31D4Q6ZUB0 917 aa13.85□□□□□ -0.19
CD9-212ENST00000610354 PALB2Q86YC2 1186 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms