RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 PRKCQQ04759 706 aa13.61□□□□□ -0.23
HLA-F-230ENST00000606273 TNP2Q05952 138 aa13.61□□□□□ -0.23
HLA-F-230ENST00000606273 ITGB3BPQ13352 177 aaPredicted RBP13.61□□□□□ -0.23
HLA-F-230ENST00000606273 UBXN2BQ14CS0 331 aa13.61□□□□□ -0.23
HLA-F-230ENST00000606273 SMG7Q92540 1137 aaKnown RBP13.61□□□□□ -0.23
HLA-F-230ENST00000606273 CLDN23Q96B33 292 aa13.61□□□□□ -0.23
HLA-F-230ENST00000606273 LLPHQ9BRT6 129 aaKnown RBP13.61□□□□□ -0.23
HLA-F-230ENST00000606273 FAM126AQ9BYI3 521 aaPredicted RBP13.61□□□□□ -0.23
HLA-F-230ENST00000606273 ANO3Q9BYT9 981 aa13.61□□□□□ -0.23
HLA-F-230ENST00000606273 C6orf50Q9HD87 102 aa13.61□□□□□ -0.23
HLA-F-230ENST00000606273 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
HLA-F-230ENST00000606273 ZDHHC3Q9NYG2 299 aa13.61□□□□□ -0.23
HLA-F-230ENST00000606273 DNAJB4Q9UDY4 337 aa13.61□□□□□ -0.23
HLA-F-230ENST00000606273 DPP7Q9UHL4 492 aa13.61□□□□□ -0.23
HLA-F-230ENST00000606273 ASPMQ8IZT6 3477 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 LOXHD1Q8IVV2 1947 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 CACNA1IQ9P0X4 2223 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 EPXP11678 715 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 HOXB4P17483 251 aaPredicted RBP13.6□□□□□ -0.23
HLA-F-230ENST00000606273 CD72P21854 359 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 SLC11A1P49279 550 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 MCM2P49736 904 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 MLF2Q15773 248 aaPredicted RBP13.6□□□□□ -0.23
HLA-F-230ENST00000606273 ZBTB41Q5SVQ8 909 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 FAM160B1Q5W0V3 765 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 DEPDC4Q8N2C3 294 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.6□□□□□ -0.23
HLA-F-230ENST00000606273 CCDC148Q8NFR7 591 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 CRYGNQ8WXF5 182 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 RSPH1Q8WYR4 309 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 DDX1Q92499 740 aaKnown RBP13.6□□□□□ -0.23
HLA-F-230ENST00000606273 FGF14Q92915 247 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 AGO4Q9HCK5 861 aaKnown RBP13.6□□□□□ -0.23
HLA-F-230ENST00000606273 SEMA4GQ9NTN9 838 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 DACT1Q9NYF0 836 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 STK39Q9UEW8 545 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 PCDHA4Q9UN74 947 aa13.6□□□□□ -0.23
HLA-F-230ENST00000606273 SPDYE3A6NKU9 549 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 TEX28O15482 410 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 LRP3O75074 770 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 ALDH2P05091 517 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 RETP07949 1114 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 CD33P20138 364 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 CUL4AQ13619 759 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 LPAL2Q16609 132 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 EARS2Q5JPH6 523 aaKnown RBP13.59□□□□□ -0.23
HLA-F-230ENST00000606273 LAIR1Q6GTX8 287 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 SWSAP1Q6NVH7 229 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 PARM1Q6UWI2 310 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 RSPO2Q6UXX9 243 aaPredicted RBP13.59□□□□□ -0.23
HLA-F-230ENST00000606273 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 CCDC60Q8IWA6 550 aaPredicted RBP13.59□□□□□ -0.23
HLA-F-230ENST00000606273 BLIDQ8IZY5 108 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 REXO1Q8N1G1 1221 aaKnown RBP13.59□□□□□ -0.23
HLA-F-230ENST00000606273 CELF5Q8N6W0 485 aaKnown RBP13.59□□□□□ -0.23
HLA-F-230ENST00000606273 DAGLBQ8NCG7 672 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 CCDC12Q8WUD4 166 aaPredicted RBP13.59□□□□□ -0.23
HLA-F-230ENST00000606273 LPPQ93052 612 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 BTBD6Q96KE9 485 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 RPS6KC1Q96S38 1066 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 NELL2Q99435 816 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 TRAIPQ9BWF2 469 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 NT5C3AQ9H0P0 336 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 PIDD1Q9HB75 910 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 LTB4R2Q9NPC1 389 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 ZNF302Q9NR11 478 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 ZNF358Q9NW07 568 aa13.59□□□□□ -0.23
HLA-F-230ENST00000606273 SCHIP1Q9P0W5 487 aaPredicted RBP13.59□□□□□ -0.23
HLA-F-230ENST00000606273 ZFP37Q9Y6Q3 630 aaPredicted RBP13.59□□□□□ -0.23
HLA-F-230ENST00000606273 KHNYNO15037 678 aaKnown RBP13.58□□□□□ -0.24
HLA-F-230ENST00000606273 B4GALT3O60512 393 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 OFD1O75665 1012 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 SPATA31D3P0C874 917 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 DARSP14868 501 aaKnown RBP13.58□□□□□ -0.24
HLA-F-230ENST00000606273 FGFR4P22455 802 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 COL8A1P27658 744 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 GNA11P29992 359 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 SREBF1P36956 1147 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 CLCN3P51790 818 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 RNASELQ05823 741 aaKnown RBP13.58□□□□□ -0.24
HLA-F-230ENST00000606273 AP3B2Q13367 1082 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 FZD5Q13467 585 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 CSRP2Q16527 193 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 LONRF3Q496Y0 759 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 NOMO2Q5JPE7 1267 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 EFCAB12Q6NXP0 572 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 ELMSAN1Q6PJG2 1045 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 GLB1LQ6UWU2 654 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 LINC00114Q6XXX2 140 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 PRR23CQ6ZRP0 262 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 SPATA31D4Q6ZUB0 917 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 GET4Q7L5D6 327 aaPredicted RBP13.58□□□□□ -0.24
HLA-F-230ENST00000606273 LINC01465Q8N7H1 131 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 HDAC7Q8WUI4 952 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 TNFRSF25Q93038 417 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 SNX21Q969T3 373 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 ZNF668Q96K58 619 aaPredicted RBP13.58□□□□□ -0.24
HLA-F-230ENST00000606273 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
HLA-F-230ENST00000606273 PRMT8Q9NR22 394 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms