RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 DCLRE1AQ6PJP8 1040 aa15.47■□□□□ 0.07
CTSA-211ENST00000606066 DDX53Q86TM3 631 aaKnown RBP15.47■□□□□ 0.07
CTSA-211ENST00000606066 CBWD2Q8IUF1 395 aa15.47■□□□□ 0.07
CTSA-211ENST00000606066 ADSSL1Q8N142 457 aa15.47■□□□□ 0.07
CTSA-211ENST00000606066 RDH13Q8NBN7 331 aa15.47■□□□□ 0.07
CTSA-211ENST00000606066 MICAL1Q8TDZ2 1067 aa15.47■□□□□ 0.07
CTSA-211ENST00000606066 CACTINQ8WUQ7 758 aaKnown RBP15.47■□□□□ 0.07
CTSA-211ENST00000606066 DHTKD1Q96HY7 919 aaPredicted RBP15.47■□□□□ 0.07
CTSA-211ENST00000606066 TLR9Q9NR96 1032 aa15.47■□□□□ 0.07
CTSA-211ENST00000606066 DMAC2Q9NW81 257 aa15.47■□□□□ 0.07
CTSA-211ENST00000606066 FRMD4BQ9Y2L6 1034 aa15.47■□□□□ 0.07
CTSA-211ENST00000606066 HCN4Q9Y3Q4 1203 aa15.47■□□□□ 0.07
CTSA-211ENST00000606066 TMEM189-UBE2V1I3L0A0 370 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 B3GAT3O94766 335 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 NR2F2P24468 414 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 CLCNKBP51801 687 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 UPP1Q16831 310 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 LEXMQ3ZCV2 418 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 TIGD5Q53EQ6 642 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 SPATA1Q5VX52 437 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 JADE1Q6IE81 842 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 CENPPQ6IPU0 288 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 TMEM173Q86WV6 379 aaPredicted RBP15.46■□□□□ 0.07
CTSA-211ENST00000606066 ZSWIM2Q8NEG5 633 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 KHSRPQ92945 711 aaKnown RBP eCLIP15.46■□□□□ 0.07
CTSA-211ENST00000606066 PPP2R3CQ969Q6 453 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 C18orf25Q96B23 403 aaPredicted RBP15.46■□□□□ 0.07
CTSA-211ENST00000606066 FNBP1Q96RU3 617 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 NGRNQ9NPE2 291 aaKnown RBP15.46■□□□□ 0.07
CTSA-211ENST00000606066 C11orf16Q9NQ32 467 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 MARCH5Q9NX47 278 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 ADAM28Q9UKQ2 775 aa15.46■□□□□ 0.07
CTSA-211ENST00000606066 SF3B1O75533 1304 aaKnown RBP eCLIP15.45■□□□□ 0.06
CTSA-211ENST00000606066 PODXLO00592 558 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 TRAPPC3O43617 180 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 NFICP08651 508 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 LRPAP1P30533 357 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 LRRC63Q05C16 580 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 SOX4Q06945 474 aaPredicted RBP15.45■□□□□ 0.06
CTSA-211ENST00000606066 ELAVL2Q12926 359 aaKnown RBP15.45■□□□□ 0.06
CTSA-211ENST00000606066 ADAM9Q13443 819 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 CEP135Q66GS9 1140 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 TMC7Q7Z402 723 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 USP37Q86T82 979 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 VPS52Q8N1B4 723 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 TCF25Q9BQ70 676 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 PAAF1Q9BRP4 392 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 UBE2ZQ9H832 354 aaPredicted RBP15.45■□□□□ 0.06
CTSA-211ENST00000606066 GOLGA2P5Q9HBQ8 144 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 CD320Q9NPF0 282 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 ENTPD7Q9NQZ7 604 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 TUBGCP4Q9UGJ1 667 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 SSX2IPQ9Y2D8 614 aa15.45■□□□□ 0.06
CTSA-211ENST00000606066 BICDL2A1A5D9 508 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 CETN3O15182 167 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 MAPK13O15264 365 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 KIF4AO95239 1232 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 SOD2P04179 222 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 BMP6P22004 513 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 PAX3P23760 479 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 CCNE1P24864 410 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 DNAJB1P25685 340 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 TFAMQ00059 246 aaKnown RBP15.44■□□□□ 0.06
CTSA-211ENST00000606066 FKBP3Q00688 224 aaKnown RBP15.44■□□□□ 0.06
CTSA-211ENST00000606066 CYP24A1Q07973 514 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 CAMK1Q14012 370 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 SMC1AQ14683 1233 aaKnown RBP15.44■□□□□ 0.06
CTSA-211ENST00000606066 PSMD6Q15008 389 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 DUOXA2Q1HG44 320 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 ZCWPW2Q504Y3 356 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 FUT10Q6P4F1 479 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 MLKLQ8NB16 471 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 BCL7CQ8WUZ0 217 aaPredicted RBP15.44■□□□□ 0.06
CTSA-211ENST00000606066 RABGGTAQ92696 567 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 SYAP1Q96A49 352 aaPredicted RBP15.44■□□□□ 0.06
CTSA-211ENST00000606066 MFSD14AQ96MC6 490 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 NSUN3Q9H649 340 aaKnown RBP15.44■□□□□ 0.06
CTSA-211ENST00000606066 PDE11AQ9HCR9 933 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 DPP3Q9NY33 737 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 CACNG4Q9UBN1 327 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 R3HCC1Q9Y3T6 440 aaKnown RBP15.44■□□□□ 0.06
CTSA-211ENST00000606066 NUB1Q9Y5A7 615 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 RALGAPA2Q2PPJ7 1873 aa15.44■□□□□ 0.06
CTSA-211ENST00000606066 PPP1R3GB7ZBB8 358 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 TNNC2P02585 160 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 TMEM191BP0C7N4 346 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 CTSAP10619 480 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 TNNI1P19237 187 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 PSMC2P35998 433 aaKnown RBP15.43■□□□□ 0.06
CTSA-211ENST00000606066 ERVFC1P60507 584 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 USP41Q3LFD5 358 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 PUS10Q3MIT2 529 aaKnown RBP15.43■□□□□ 0.06
CTSA-211ENST00000606066 CCDC183Q5T5S1 534 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 ANKRD40Q6AI12 368 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 KLHL10Q6JEL2 608 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 KIAA1841Q6NSI8 718 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 FOXR2Q6PJQ5 311 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 WDR49Q8IV35 697 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 EFCAB13Q8IY85 973 aa15.43■□□□□ 0.06
CTSA-211ENST00000606066 GJD3Q8N144 294 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms