RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 GTF2H1P32780 548 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 OR1G1P47890 313 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MARSP56192 900 aaKnown RBP10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 BFSP1Q12934 665 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GPM6BQ13491 265 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DUOXA2Q1HG44 320 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SEZ6Q53EL9 994 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GLRA4Q5JXX5 417 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 JADE1Q6IE81 842 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FAM186BQ8IYM0 893 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DEFB123Q8N688 67 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 KLHL23Q8NBE8 558 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SPATA18Q8TC71 538 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PARD3BQ8TEW8 1205 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NOC3LQ8WTT2 800 aaKnown RBP10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NELFBQ8WX92 580 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ARNTL2Q8WYA1 636 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MRPL38Q96DV4 380 aaKnown RBP10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 OXCT2Q9BYC2 517 aaPredicted RBP10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NGRNQ9NPE2 291 aaKnown RBP10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TLR9Q9NR96 1032 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 INTS13Q9NVM9 706 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TMEM63CQ9P1W3 806 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CHD7Q9P2D1 2997 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ANO9A1A5B4 782 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GOLGA8IPA6NC78 632 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GOLGA8JA6NMD2 632 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PODXLO00592 558 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SYN3O14994 580 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 B4GALT3O60512 393 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 AKAP3O75969 853 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 KIF4AO95239 1232 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 STAU1O95793 577 aaKnown RBP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NFICP08651 508 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 AARSP49588 968 aaKnown RBP eCLIP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SOX4Q06945 474 aaPredicted RBP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DPCR1Q3MIW9 517 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SV2CQ496J9 727 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CEP135Q66GS9 1140 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ANKRD40Q6AI12 368 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SMYD5Q6GMV2 418 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CAVIN1Q6NZI2 390 aaKnown RBP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FUT10Q6P4F1 479 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FRMD5Q7Z6J6 570 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FILIP1Q7Z7B0 1213 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FAM114A1Q8IWE2 563 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 EFCAB13Q8IY85 973 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CSGALNACT2Q8N6G5 542 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SPPL3Q8TCT6 385 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CDCA3Q99618 268 aaPredicted RBP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 HERC2P3Q9BVR0 1158 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NAT10Q9H0A0 1025 aaKnown RBP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PDE11AQ9HCR9 933 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MARCH5Q9NX47 278 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MTMR10Q9NXD2 777 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CTNND2Q9UQB3 1225 aa10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 R3HCC1Q9Y3T6 440 aaKnown RBP10.25□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CASTOR2A6NHX0 329 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PIRO00625 290 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FSCN2O14926 492 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PMM2O15305 246 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NCK2O43639 380 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 LPXNO60711 386 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TADA2AO75478 443 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 B3GAT3O94766 335 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 URODP06132 367 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CCDC192P0DO97 292 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CTSAP10619 480 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TNNI1P19237 187 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ATICP31939 592 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GLUD2P49448 558 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CLCNKBP51801 687 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TFAMQ00059 246 aaKnown RBP10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MYO1EQ12965 1108 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SMC1AQ14683 1233 aaKnown RBP10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GRIN2CQ14957 1233 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 USP41Q3LFD5 358 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 C9orf57Q5W0N0 161 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 KLHL10Q6JEL2 608 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GDPD5Q8WTR4 605 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 POF1BQ8WVV4 589 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TAF4BQ92750 862 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FAM212AQ96EL1 285 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FAXDC2Q96IV6 333 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SUSD3Q96L08 255 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 BPIFA3Q9BQP9 254 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ZBP1Q9H171 429 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PRDM12Q9H4Q4 367 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FAM124BQ9H5Z6 455 aaPredicted RBP10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 VRTNQ9H8Y1 702 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CHST7Q9NS84 486 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DPP3Q9NY33 737 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 HCSTQ9UBK5 93 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TUBGCP4Q9UGJ1 667 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ARMCX3Q9UH62 379 aaPredicted RBP10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DSEQ9UL01 958 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MTUS1Q9ULD2 1270 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms