RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
CDCA3-211ENST00000603043 NT5DC4Q86YG4 428 aa16.87■□□□□ 0.29
CDCA3-211ENST00000603043 MLKLQ8NB16 471 aa16.87■□□□□ 0.29
CDCA3-211ENST00000603043 POF1BQ8WVV4 589 aa16.87■□□□□ 0.29
CDCA3-211ENST00000603043 SYAP1Q96A49 352 aaPredicted RBP16.87■□□□□ 0.29
CDCA3-211ENST00000603043 PUF60Q9UHX1 559 aaKnown RBP16.87■□□□□ 0.29
CDCA3-211ENST00000603043 LZTS1Q9Y250 596 aa16.87■□□□□ 0.29
CDCA3-211ENST00000603043 BICDL2A1A5D9 508 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 RPL9P32969 192 aaKnown RBP16.86■□□□□ 0.29
CDCA3-211ENST00000603043 PTPROQ16827 1216 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 DPCR1Q3MIW9 517 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 SPATA1Q5VX52 437 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 BEST2Q8NFU1 509 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 HASPINQ8TF76 798 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 MYLIPQ8WY64 445 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 CCDC127Q96BQ5 260 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 EEF2KMTQ96G04 330 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 ADAM28Q9UKQ2 775 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 PODXLO00592 558 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 AKAP3O75969 853 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 B3GAT3O94766 335 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 CSPG5O95196 566 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 IGFBP4P22692 258 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 DNAJB1P25685 340 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 NLRP12P59046 1061 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 TFAMQ00059 246 aaKnown RBP16.86■□□□□ 0.29
CDCA3-211ENST00000603043 FKBP3Q00688 224 aaKnown RBP16.86■□□□□ 0.29
CDCA3-211ENST00000603043 ADGRE1Q14246 886 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 PSMD6Q15008 389 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 DDX53Q86TM3 631 aaKnown RBP16.86■□□□□ 0.29
CDCA3-211ENST00000603043 MFSD14AQ96MC6 490 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 FNBP1Q96RU3 617 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 LMAN2LQ9H0V9 348 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 TLR9Q9NR96 1032 aa16.86■□□□□ 0.29
CDCA3-211ENST00000603043 SCN1AP35498 2009 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 CETN3O15182 167 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 TADA2AO75478 443 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 DLATP10515 647 aaKnown RBP16.85■□□□□ 0.29
CDCA3-211ENST00000603043 LRPAP1P30533 357 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 GUCY2FP51841 1108 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 CAMK1Q14012 370 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 DCLRE1AQ6PJP8 1040 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 TMEM130Q8N3G9 435 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 C3orf58Q8NDZ4 430 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 CACTINQ8WUQ7 758 aaKnown RBP16.85■□□□□ 0.29
CDCA3-211ENST00000603043 MRPL38Q96DV4 380 aaKnown RBP16.85■□□□□ 0.29
CDCA3-211ENST00000603043 NAP1L5Q96NT1 182 aaPredicted RBP16.85■□□□□ 0.29
CDCA3-211ENST00000603043 STK39Q9UEW8 545 aa16.85■□□□□ 0.29
CDCA3-211ENST00000603043 TMEM189-UBE2V1I3L0A0 370 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 MAPK13O15264 365 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 FOSL2P15408 326 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 STX17P56962 302 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 LMBRD2Q68DH5 695 aaPredicted RBP16.84■□□□□ 0.29
CDCA3-211ENST00000603043 TTI2Q6NXR4 508 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 FOXR2Q6PJQ5 311 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 WDR49Q8IV35 697 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 FAM186BQ8IYM0 893 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 VN1R3Q9BXE9 311 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 DPP3Q9NY33 737 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 DACH1Q9UI36 760 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 SF3B1O75533 1304 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDCA3-211ENST00000603043 PTPRJQ12913 1337 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 TMEM191BP0C7N4 346 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 TNNI1P19237 187 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 PSMC2P35998 433 aaKnown RBP16.84■□□□□ 0.29
CDCA3-211ENST00000603043 FUT10Q6P4F1 479 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 SASS6Q6UVJ0 657 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 ZC3H3Q8IXZ2 948 aaKnown RBP16.84■□□□□ 0.29
CDCA3-211ENST00000603043 VPS52Q8N1B4 723 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 FAM84AQ96KN4 292 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 POP1Q99575 1024 aaKnown RBP16.84■□□□□ 0.29
CDCA3-211ENST00000603043 CGRRF1Q99675 332 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 TCF25Q9BQ70 676 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 MKNK1Q9BUB5 465 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 MTMR12Q9C0I1 747 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 INTS13Q9NVM9 706 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 LMCD1Q9NZU5 365 aa16.84■□□□□ 0.29
CDCA3-211ENST00000603043 VWA8A3KMH1 1905 aa16.83■□□□□ 0.29
CDCA3-211ENST00000603043 EYSQ5T1H1 3165 aa16.83■□□□□ 0.28
CDCA3-211ENST00000603043 EPB41P11171 864 aaKnown RBP16.83■□□□□ 0.28
CDCA3-211ENST00000603043 POU3F3P20264 500 aaPredicted RBP16.83■□□□□ 0.28
CDCA3-211ENST00000603043 SKOR2Q2VWA4 1001 aaPredicted RBP16.83■□□□□ 0.28
CDCA3-211ENST00000603043 INTS8Q75QN2 995 aaKnown RBP16.83■□□□□ 0.28
CDCA3-211ENST00000603043 OR5B17Q8NGF7 314 aa16.83■□□□□ 0.28
CDCA3-211ENST00000603043 PARD3BQ8TEW8 1205 aa16.83■□□□□ 0.28
CDCA3-211ENST00000603043 ANKRD36BP1Q96IX9 119 aa16.83■□□□□ 0.28
CDCA3-211ENST00000603043 DUSP9Q99956 384 aaKnown RBP16.83■□□□□ 0.28
CDCA3-211ENST00000603043 GPR62Q9BZJ7 368 aa16.83■□□□□ 0.28
CDCA3-211ENST00000603043 GZF1Q9H116 711 aaPredicted RBP16.83■□□□□ 0.28
CDCA3-211ENST00000603043 ENTPD7Q9NQZ7 604 aa16.83■□□□□ 0.28
CDCA3-211ENST00000603043 RWDD2AQ9UIY3 292 aa16.83■□□□□ 0.28
CDCA3-211ENST00000603043 NUB1Q9Y5A7 615 aa16.83■□□□□ 0.28
CDCA3-211ENST00000603043 MTCH2Q9Y6C9 303 aa16.83■□□□□ 0.28
CDCA3-211ENST00000603043 SLC16A3O15427 465 aaKnown RBP16.82■□□□□ 0.28
CDCA3-211ENST00000603043 EFEMP2O95967 443 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 TNNC2P02585 160 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 SOD2P04179 222 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 IGFBP6P24592 240 aaPredicted RBP16.82■□□□□ 0.28
CDCA3-211ENST00000603043 ERVFC1P60507 584 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 DUOXA2Q1HG44 320 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms