RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 MKNK1Q9BUB5 465 aa20.95■□□□□ 0.94
UPF1-209ENST00000600310 TDRD15B5MCY1 1934 aaKnown RBP20.95■□□□□ 0.94
UPF1-209ENST00000600310 F8W810 466 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 PODXLO00592 558 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 B3GAT3O94766 335 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 KIF4AO95239 1232 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 EFEMP2O95967 443 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 POU3F3P20264 500 aaPredicted RBP20.94■□□□□ 0.94
UPF1-209ENST00000600310 DNAJB1P25685 340 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 PSMC2P35998 433 aaKnown RBP20.94■□□□□ 0.94
UPF1-209ENST00000600310 GUCY2FP51841 1108 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 STX17P56962 302 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 TFAMQ00059 246 aaKnown RBP20.94■□□□□ 0.94
UPF1-209ENST00000600310 CAMK1Q14012 370 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 ADGRE1Q14246 886 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 SASS6Q6UVJ0 657 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 WDR49Q8IV35 697 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 CACTINQ8WUQ7 758 aaKnown RBP20.94■□□□□ 0.94
UPF1-209ENST00000600310 CCDC127Q96BQ5 260 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 FNBP1Q96RU3 617 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 GZF1Q9H116 711 aaPredicted RBP20.94■□□□□ 0.94
UPF1-209ENST00000600310 INTS13Q9NVM9 706 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 LMCD1Q9NZU5 365 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 STK39Q9UEW8 545 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 DACH1Q9UI36 760 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 RWDD2AQ9UIY3 292 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 ADAM28Q9UKQ2 775 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 NLRC5Q86WI3 1866 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 TRIP11Q15643 1979 aa20.94■□□□□ 0.94
UPF1-209ENST00000600310 TULP1O00294 542 aaPredicted RBP20.93■□□□□ 0.94
UPF1-209ENST00000600310 TADA2AO75478 443 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 ENPEPQ07075 957 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 NFKBIBQ15653 356 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 PTPROQ16827 1216 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 CT47A1Q5JQC4 288 aaPredicted RBP20.93■□□□□ 0.94
UPF1-209ENST00000600310 CD300LGQ6UXG3 332 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 FAM186BQ8IYM0 893 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 RNF168Q8IYW5 571 aaPredicted RBP20.93■□□□□ 0.94
UPF1-209ENST00000600310 TMEM130Q8N3G9 435 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 PLEKHO2Q8TD55 490 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 TMC2Q8TDI7 906 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 PARD3BQ8TEW8 1205 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 EEF2KMTQ96G04 330 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 CEP63Q96MT8 703 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 GAS2L1Q99501 681 aaPredicted RBP20.93■□□□□ 0.94
UPF1-209ENST00000600310 CGRRF1Q99675 332 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 VN1R3Q9BXE9 311 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 DPP3Q9NY33 737 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 STXBP5LQ9Y2K9 1186 aa20.93■□□□□ 0.94
UPF1-209ENST00000600310 ANO9A1A5B4 782 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 DLATP10515 647 aaKnown RBP20.92■□□□□ 0.94
UPF1-209ENST00000600310 EPB41P11171 864 aaKnown RBP20.92■□□□□ 0.94
UPF1-209ENST00000600310 IGFBP6P24592 240 aaPredicted RBP20.92■□□□□ 0.94
UPF1-209ENST00000600310 MCCD1P59942 119 aaPredicted RBP20.92■□□□□ 0.94
UPF1-209ENST00000600310 CLDN10P78369 228 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 DUOXA2Q1HG44 320 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 C9orf57Q5W0N0 161 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 FUT10Q6P4F1 479 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 INTS8Q75QN2 995 aaKnown RBP20.92■□□□□ 0.94
UPF1-209ENST00000600310 C3orf58Q8NDZ4 430 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 MYLIPQ8WY64 445 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 MRPL38Q96DV4 380 aaKnown RBP20.92■□□□□ 0.94
UPF1-209ENST00000600310 BORCS6Q96GS4 357 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 ANKRD36BP1Q96IX9 119 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 MED15Q96RN5 788 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 TLR9Q9NR96 1032 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 PTPRJQ12913 1337 aa20.92■□□□□ 0.94
UPF1-209ENST00000600310 PIRO00625 290 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 SLC16A3O15427 465 aaKnown RBP20.91■□□□□ 0.94
UPF1-209ENST00000600310 SF3B1O75533 1304 aaKnown RBP eCLIP20.91■□□□□ 0.94
UPF1-209ENST00000600310 TMEM191BP0C7N4 346 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 TNNI1P19237 187 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 ERCC5P28715 1186 aaPredicted RBP20.91■□□□□ 0.94
UPF1-209ENST00000600310 VAMP7P51809 220 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 LMBRD2Q68DH5 695 aaPredicted RBP20.91■□□□□ 0.94
UPF1-209ENST00000600310 PDE12Q6L8Q7 609 aaKnown RBP20.91■□□□□ 0.94
UPF1-209ENST00000600310 FILIP1Q7Z7B0 1213 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 USP37Q86T82 979 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 VPS52Q8N1B4 723 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 CSGALNACT2Q8N6G5 542 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 C1orf127Q8N9H9 656 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 OR5B17Q8NGF7 314 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 HASPINQ8TF76 798 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 POP1Q99575 1024 aaKnown RBP20.91■□□□□ 0.94
UPF1-209ENST00000600310 GPR62Q9BZJ7 368 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 MTMR12Q9C0I1 747 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 ANO10Q9NW15 660 aa20.91■□□□□ 0.94
UPF1-209ENST00000600310 ANK1P16157 1881 aa20.9■□□□□ 0.94
UPF1-209ENST00000600310 PDCD11Q14690 1871 aaKnown RBP20.9■□□□□ 0.94
UPF1-209ENST00000600310 LRRIQ3A6PVS8 624 aaPredicted RBP20.9■□□□□ 0.94
UPF1-209ENST00000600310 DLL1O00548 723 aa20.9■□□□□ 0.94
UPF1-209ENST00000600310 FSCN2O14926 492 aa20.9■□□□□ 0.94
UPF1-209ENST00000600310 LETM1O95202 739 aaPredicted RBP20.9■□□□□ 0.94
UPF1-209ENST00000600310 TNNC2P02585 160 aa20.9■□□□□ 0.94
UPF1-209ENST00000600310 SOD2P04179 222 aa20.9■□□□□ 0.94
UPF1-209ENST00000600310 KRT13P13646 458 aa20.9■□□□□ 0.94
UPF1-209ENST00000600310 ERVFC1P60507 584 aa20.9■□□□□ 0.94
UPF1-209ENST00000600310 ELAVL2Q12926 359 aaKnown RBP20.9■□□□□ 0.94
UPF1-209ENST00000600310 ZNF516Q92618 1163 aa20.9■□□□□ 0.94
UPF1-209ENST00000600310 FAM84AQ96KN4 292 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms