RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TTI2Q6NXR4 508 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 DCLRE1AQ6PJP8 1040 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 DDX53Q86TM3 631 aaKnown RBP14.91□□□□□ -0.02
VRK3-219ENST00000600137 ZNF516Q92618 1163 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 MRPL38Q96DV4 380 aaKnown RBP14.91□□□□□ -0.02
VRK3-219ENST00000600137 COLEC11Q9BWP8 271 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 LMAN2LQ9H0V9 348 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 SLC38A7Q9NVC3 462 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 UBQLN1Q9UMX0 589 aaKnown RBP14.91□□□□□ -0.02
VRK3-219ENST00000600137 PCDHGC5Q9Y5F6 944 aa14.91□□□□□ -0.02
VRK3-219ENST00000600137 VWA8A3KMH1 1905 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 CARNS1A5YM72 827 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 PIRO00625 290 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 MAPK13O15264 365 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 EXOC3O60645 756 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 RPL9P32969 192 aaKnown RBP14.9□□□□□ -0.02
VRK3-219ENST00000600137 CLDN10P78369 228 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 ADAM9Q13443 819 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 PSMD6Q15008 389 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 FOXR2Q6PJQ5 311 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 NT5DC4Q86YG4 428 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 OR5B17Q8NGF7 314 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 PARD3BQ8TEW8 1205 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 UROC1Q96N76 676 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 POP1Q99575 1024 aaKnown RBP14.9□□□□□ -0.02
VRK3-219ENST00000600137 ZBP1Q9H171 429 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 CHST7Q9NS84 486 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 INTS13Q9NVM9 706 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 ADAM28Q9UKQ2 775 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 PRUNE2Q8WUY3 3088 aa14.9□□□□□ -0.02
VRK3-219ENST00000600137 SPTBN5Q9NRC6 3674 aaKnown RBP14.9□□□□□ -0.02
VRK3-219ENST00000600137 PODXLO00592 558 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 NR2F2P24468 414 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 NLRP12P59046 1061 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 TMEM132DQ14C87 1099 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 KIAA0319Q5VV43 1072 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 LMBRD2Q68DH5 695 aaPredicted RBP14.89□□□□□ -0.03
VRK3-219ENST00000600137 FUT10Q6P4F1 479 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 C1orf127Q8N9H9 656 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 NOC3LQ8WTT2 800 aaKnown RBP14.89□□□□□ -0.03
VRK3-219ENST00000600137 NELFBQ8WX92 580 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 EEF2KMTQ96G04 330 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 DDX27Q96GQ7 796 aaKnown RBP14.89□□□□□ -0.03
VRK3-219ENST00000600137 TMEM169Q96HH4 297 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 SIX4Q9UIU6 781 aa14.89□□□□□ -0.03
VRK3-219ENST00000600137 SPTLC1O15269 473 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 B3GAT3O94766 335 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 SOD2P04179 222 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 PPP1R2P41236 205 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 BRCC3P46736 316 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 AARSP49588 968 aaKnown RBP eCLIP14.88□□□□□ -0.03
VRK3-219ENST00000600137 DLG4P78352 724 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 KRT17Q04695 432 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 LRRC63Q05C16 580 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 SURF1Q15526 300 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 DPCR1Q3MIW9 517 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 C9orf57Q5W0N0 161 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 KLHL10Q6JEL2 608 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 VPS52Q8N1B4 723 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 BEST2Q8NFU1 509 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 HASPINQ8TF76 798 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 GAS2L1Q99501 681 aaPredicted RBP14.88□□□□□ -0.03
VRK3-219ENST00000600137 TLR9Q9NR96 1032 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 DPP3Q9NY33 737 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 IRAK3Q9Y616 596 aa14.88□□□□□ -0.03
VRK3-219ENST00000600137 BRWD1Q9NSI6 2320 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 LRRIQ3A6PVS8 624 aaPredicted RBP14.87□□□□□ -0.03
VRK3-219ENST00000600137 HIDE1A8MVS5 230 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 PSMA7O14818 248 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 TADA2AO75478 443 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 CST3P01034 146 aaPredicted RBP14.87□□□□□ -0.03
VRK3-219ENST00000600137 CTSAP10619 480 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 IGFBP4P22692 258 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 RPL13P26373 211 aaKnown RBP14.87□□□□□ -0.03
VRK3-219ENST00000600137 STX17P56962 302 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 TFAMQ00059 246 aaKnown RBP14.87□□□□□ -0.03
VRK3-219ENST00000600137 FKBP3Q00688 224 aaKnown RBP14.87□□□□□ -0.03
VRK3-219ENST00000600137 KLHL40Q2TBA0 621 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 TIGD5Q53EQ6 642 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 CCDC183Q5T5S1 534 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 CEP135Q66GS9 1140 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 ADGRD2Q7Z7M1 963 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 WDR49Q8IV35 697 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 MRPL43Q8N983 215 aaKnown RBP14.87□□□□□ -0.03
VRK3-219ENST00000600137 MLKLQ8NB16 471 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 TMC2Q8TDI7 906 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 AUTS2Q8WXX7 1259 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 CCDC127Q96BQ5 260 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 B3GALT6Q96L58 329 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 CGRRF1Q99675 332 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 MKNK1Q9BUB5 465 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 HERC2P3Q9BVR0 1158 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 PUF60Q9UHX1 559 aaKnown RBP14.87□□□□□ -0.03
VRK3-219ENST00000600137 STXBP5LQ9Y2K9 1186 aa14.87□□□□□ -0.03
VRK3-219ENST00000600137 C2orf71A6NGG8 1288 aa14.86□□□□□ -0.03
VRK3-219ENST00000600137 I3L4J1 428 aa14.86□□□□□ -0.03
VRK3-219ENST00000600137 CETN3O15182 167 aa14.86□□□□□ -0.03
VRK3-219ENST00000600137 XPOTO43592 962 aaKnown RBP14.86□□□□□ -0.03
VRK3-219ENST00000600137 C4BPAP04003 597 aaKnown RBP14.86□□□□□ -0.03
VRK3-219ENST00000600137 FOSL2P15408 326 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms