RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 MRPL42Q9Y6G3 142 aaKnown RBP13.68□□□□□ -0.22
CHMP2A-206ENST00000600118 RALGAPA2Q2PPJ7 1873 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 ANO9A1A5B4 782 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 STX10O60499 249 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 TMEM191BP0C7N4 346 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 RPL9P32969 192 aaKnown RBP13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 MTIF2P46199 727 aaKnown RBP13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 GCLMP48507 274 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 MAN2A1Q16706 1144 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 CBWD6Q4V339 395 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 DCAF17Q5H9S7 520 aaPredicted RBP13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 CBWD3Q5JTY5 395 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 MIIPQ5JXC2 388 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 CBWD5Q5RIA9 395 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 TCERG1LQ5VWI1 586 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 SCARA3Q6AZY7 606 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 FIBCD1Q8N539 461 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 CLP1Q92989 425 aaKnown RBP13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 ANKRD36BP1Q96IX9 119 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 TMEM175Q9BSA9 504 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 TUBGCP2Q9BSJ2 902 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 GOLGA2P5Q9HBQ8 144 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 TMEM8AQ9HCN3 771 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 DPP3Q9NY33 737 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 YBX2Q9Y2T7 364 aaKnown RBP13.67□□□□□ -0.22
CHMP2A-206ENST00000600118 CASTOR2A6NHX0 329 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 GOLGA6L19H0YKK7 550 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 PIRO00625 290 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 TNNC2P02585 160 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 GALTP07902 379 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 MYOGP15173 224 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 SLC11A1P49279 550 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 FMO5P49326 533 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 MXI1P50539 228 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 TPM4P67936 248 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 RNASELQ05823 741 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 KCNH2Q12809 1159 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 UPP1Q16831 310 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 C9orf57Q5W0N0 161 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 KRT39Q6A163 491 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 DDX27Q96GQ7 796 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 UROC1Q96N76 676 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 PAAF1Q9BRP4 392 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 PBX4Q9BYU1 374 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 TAB2Q9NYJ8 693 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 CACNG4Q9UBN1 327 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 ITGA11Q9UKX5 1188 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 COLQQ9Y215 455 aaPredicted RBP13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 COQ4Q9Y3A0 265 aa13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-206ENST00000600118 LINC01553A4QN01 128 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 TMEM189-UBE2V1I3L0A0 370 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 TULP1O00294 542 aaPredicted RBP13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 PODXLO00592 558 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 PPEF2O14830 753 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 P4HA2O15460 535 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 ZC3H11AO75152 810 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 VNN1O95497 513 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 ITGB3P05106 788 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 LAG3P18627 525 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 CDK11BP21127 795 aaKnown RBP13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 IGFBP6P24592 240 aaPredicted RBP13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 PBX2P40425 430 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 CLCNKBP51801 687 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 COPB1P53618 953 aaKnown RBP13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 BCAR1P56945 870 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 RBP5P82980 135 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 SMAD3P84022 425 aaKnown RBP13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 LRIT3Q3SXY7 679 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 CD300LGQ6UXG3 332 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 CREBRFQ8IUR6 639 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 ANKRD20A12PQ8NF67 263 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 TAS1R2Q8TE23 839 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 FAM193BQ96PV7 902 aaPredicted RBP13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 NDST4Q9H3R1 872 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 MARCH5Q9NX47 278 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 ANK1P16157 1881 aa13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
CHMP2A-206ENST00000600118 CARNS1A5YM72 827 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 LGALS16A8MUM7 142 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 NRP1O14786 923 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 STAU1O95793 577 aaKnown RBP13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 CST3P01034 146 aaPredicted RBP13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 ALDH2P05091 517 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 CA3P07451 260 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 OR1G1P47890 313 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 BIRC3Q13489 604 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 NCOA4Q13772 614 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 RAB30Q15771 203 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms