RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 KIAA1841Q6NSI8 718 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 CEP57Q86XR8 500 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 NELFCDQ8IXH7 590 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 C3orf58Q8NDZ4 430 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 ZSWIM2Q8NEG5 633 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 SAAL1Q96ER3 474 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 KIF12Q96FN5 646 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
ZNF548-209ENST00000598895 PCIF1Q9H4Z3 704 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 RPF1Q9H9Y2 349 aaKnown RBP13.13□□□□□ -0.31
ZNF548-209ENST00000598895 SLC39A2Q9NP94 309 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 MRPL17Q9NRX2 175 aaKnown RBP13.13□□□□□ -0.31
ZNF548-209ENST00000598895 CLEC1BQ9P126 229 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 CNTN3Q9P232 1028 aa13.13□□□□□ -0.31
ZNF548-209ENST00000598895 AGO2Q9UKV8 859 aaKnown RBP13.13□□□□□ -0.31
ZNF548-209ENST00000598895 ANK1P16157 1881 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 PLXNA3P51805 1871 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 GOLGA8IPA6NC78 632 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 GOLGA8JA6NMD2 632 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 B3GAT3O94766 335 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 CNPP09543 421 aaKnown RBP13.12□□□□□ -0.31
ZNF548-209ENST00000598895 BMP1P13497 986 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 KCNE1P15382 129 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 EPCAMP16422 314 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 RPL17P18621 184 aaKnown RBP13.12□□□□□ -0.31
ZNF548-209ENST00000598895 KLRC2P26717 231 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 CDC25BP30305 580 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 ADSSP30520 456 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 BRCC3P46736 316 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 GUCY2FP51841 1108 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 PLCB2Q00722 1185 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 FAM171A1Q5VUB5 890 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 SLFN12LQ6IEE8 588 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-209ENST00000598895 RNF168Q8IYW5 571 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-209ENST00000598895 KIAA1524Q8TCG1 905 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 ADAMTS19Q8TE59 1207 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 RIN2Q8WYP3 895 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-209ENST00000598895 KLHL5Q96PQ7 755 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 CPSF3Q9UKF6 684 aaKnown RBP13.12□□□□□ -0.31
ZNF548-209ENST00000598895 HCFC2Q9Y5Z7 792 aa13.12□□□□□ -0.31
ZNF548-209ENST00000598895 SF3B1O75533 1304 aaKnown RBP eCLIP13.12□□□□□ -0.31
ZNF548-209ENST00000598895 PRUNE2Q8WUY3 3088 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 TTC26A0AVF1 554 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 DLL1O00548 723 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 PODXLO00592 558 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 EFEMP2O95967 443 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 ALCAMQ13740 583 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 UPP1Q16831 310 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 USP41Q3LFD5 358 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 KMT5BQ4FZB7 885 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 RTP2Q5QGT7 225 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 KIAA0319Q5VV43 1072 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 JADE1Q6IE81 842 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 KANK3Q6NY19 840 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 CNNM4Q6P4Q7 775 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 DCLRE1AQ6PJP8 1040 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 KRBA2Q6ZNG9 492 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 STXBP4Q6ZWJ1 553 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 UROC1Q96N76 676 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 CDCA3Q99618 268 aaPredicted RBP13.11□□□□□ -0.31
ZNF548-209ENST00000598895 CBWD1Q9BRT8 395 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 FAM213AQ9BRX8 229 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 EMILIN2Q9BXX0 1053 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 TMEM206Q9H813 350 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 SLC38A7Q9NVC3 462 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 CD207Q9UJ71 328 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 STYXL1Q9Y6J8 313 aa13.11□□□□□ -0.31
ZNF548-209ENST00000598895 VWA8A3KMH1 1905 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 FAM237AA0A1B0GTK4 181 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 GRXCR2A6NFK2 248 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 TEX28O15482 410 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 MBTPS2O43462 519 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 KLRC4O43908 158 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 ZNF202O95125 648 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 NFICP08651 508 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 SPATA31D3P0C874 917 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 SRGAP2BP0DMP2 458 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 HOXD13P35453 343 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 DSG1Q02413 1049 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 KCNC3Q14003 757 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 KYAT1Q16773 422 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 ANKRD54Q6NXT1 300 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 ARMCX5Q6P1M9 558 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 CD300LGQ6UXG3 332 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 CRELD2Q6UXH1 353 aaPredicted RBP13.1□□□□□ -0.31
ZNF548-209ENST00000598895 SPATA31D4Q6ZUB0 917 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 EPM2AIP1Q7L775 607 aaPredicted RBP13.1□□□□□ -0.31
ZNF548-209ENST00000598895 PALB2Q86YC2 1186 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
ZNF548-209ENST00000598895 MSLNLQ96KJ4 702 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 PLEKHA5Q9HAU0 1116 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 CHST7Q9NS84 486 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 EXOC1Q9NV70 894 aa13.1□□□□□ -0.31
ZNF548-209ENST00000598895 STK39Q9UEW8 545 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms