RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 TCF25Q9BQ70 676 aa21.78■■□□□ 1.08
IRF3-221ENST00000598808 LMAN2LQ9H0V9 348 aa21.78■■□□□ 1.08
IRF3-221ENST00000598808 PDE11AQ9HCR9 933 aa21.78■■□□□ 1.08
IRF3-221ENST00000598808 FRMD4BQ9Y2L6 1034 aa21.78■■□□□ 1.08
IRF3-221ENST00000598808 B3GAT3O94766 335 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 ADRB2P07550 413 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 DLATP10515 647 aaKnown RBP21.77■■□□□ 1.08
IRF3-221ENST00000598808 DNAJB1P25685 340 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 RPL13P26373 211 aaKnown RBP21.77■■□□□ 1.08
IRF3-221ENST00000598808 UBE3AQ05086 875 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 CCDC85BQ15834 202 aaPredicted RBP21.77■■□□□ 1.08
IRF3-221ENST00000598808 ANO6Q4KMQ2 910 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 LMBRD2Q68DH5 695 aaPredicted RBP21.77■■□□□ 1.08
IRF3-221ENST00000598808 TMC7Q7Z402 723 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 ADSSL1Q8N142 457 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 VPS52Q8N1B4 723 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 TMEM130Q8N3G9 435 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 TRIML1Q8N9V2 468 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 CCDC127Q96BQ5 260 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 MRPL38Q96DV4 380 aaKnown RBP21.77■■□□□ 1.08
IRF3-221ENST00000598808 FNBP1Q96RU3 617 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 ADAM28Q9UKQ2 775 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 NUB1Q9Y5A7 615 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 REV3LO60673 3130 aa21.77■■□□□ 1.08
IRF3-221ENST00000598808 ANK1P16157 1881 aa21.77■■□□□ 1.07
IRF3-221ENST00000598808 TRIM49BA6NDI0 452 aa21.77■■□□□ 1.07
IRF3-221ENST00000598808 TMEM191BP0C7N4 346 aa21.77■■□□□ 1.07
IRF3-221ENST00000598808 PPP1R2P41236 205 aa21.77■■□□□ 1.07
IRF3-221ENST00000598808 WNT7BP56706 349 aa21.77■■□□□ 1.07
IRF3-221ENST00000598808 BMS1Q14692 1282 aaKnown RBP21.77■■□□□ 1.07
IRF3-221ENST00000598808 DDX27Q96GQ7 796 aaKnown RBP21.77■■□□□ 1.07
IRF3-221ENST00000598808 TRAF3IP3Q9Y228 551 aa21.77■■□□□ 1.07
IRF3-221ENST00000598808 DERAQ9Y315 318 aa21.77■■□□□ 1.07
IRF3-221ENST00000598808 PCDHGC5Q9Y5F6 944 aa21.77■■□□□ 1.07
IRF3-221ENST00000598808 MTCH2Q9Y6C9 303 aa21.77■■□□□ 1.07
IRF3-221ENST00000598808 SF3B1O75533 1304 aaKnown RBP eCLIP21.76■■□□□ 1.073e-7■■■■■ 55.1
IRF3-221ENST00000598808 CLSTN1O94985 981 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 CD44P16070 742 aaKnown RBP21.76■■□□□ 1.07
IRF3-221ENST00000598808 BMP6P22004 513 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 ZNF165P49910 485 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 CYP24A1Q07973 514 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 UPP1Q16831 310 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 TIGD5Q53EQ6 642 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 FUT10Q6P4F1 479 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 DDX53Q86TM3 631 aaKnown RBP21.76■■□□□ 1.07
IRF3-221ENST00000598808 EFCAB13Q8IY85 973 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 NELFBQ8WX92 580 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 EEF2KMTQ96G04 330 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 FAM84AQ96KN4 292 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 BPIFA3Q9BQP9 254 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 LZTS1Q9Y250 596 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 C2CD2Q9Y426 696 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 A0A0C4DFX4 3053 aa21.76■■□□□ 1.07
IRF3-221ENST00000598808 C2CD2LO14523 706 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 TNNI1P19237 187 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 IRS1P35568 1242 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 STX17P56962 302 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 ERVFC1P60507 584 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 POU5F1Q01860 360 aaKnown RBP21.75■■□□□ 1.07
IRF3-221ENST00000598808 ADAM9Q13443 819 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 SKIV2LQ15477 1246 aaKnown RBP21.75■■□□□ 1.07
IRF3-221ENST00000598808 SURF1Q15526 300 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 COBLL1Q53SF7 1204 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 HS1BP3Q53T59 392 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 KIAA1841Q6NSI8 718 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 DCLRE1AQ6PJP8 1040 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 CEP57Q86XR8 500 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 CACTINQ8WUQ7 758 aaKnown RBP21.75■■□□□ 1.07
IRF3-221ENST00000598808 DHTKD1Q96HY7 919 aaPredicted RBP21.75■■□□□ 1.07
IRF3-221ENST00000598808 ANKRD36BP1Q96IX9 119 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 TSPAN18Q96SJ8 248 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 DPP3Q9NY33 737 aa21.75■■□□□ 1.07
IRF3-221ENST00000598808 R3HCC1Q9Y3T6 440 aaKnown RBP21.75■■□□□ 1.07
IRF3-221ENST00000598808 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.75■■□□□ 1.07
IRF3-221ENST00000598808 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.74■■□□□ 1.07
IRF3-221ENST00000598808 TNNC2P02585 160 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 URODP06132 367 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 KRT19P08727 400 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 CYP3A5P20815 502 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 CCNE1P24864 410 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 RPL9P32969 192 aaKnown RBP21.74■■□□□ 1.07
IRF3-221ENST00000598808 CASP4P49662 377 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 PAK1Q13153 545 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 SPATA1Q5VX52 437 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 ANKRD40Q6AI12 368 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 SLC9A9Q8IVB4 645 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 MAFAQ8NHW3 353 aaPredicted RBP21.74■■□□□ 1.07
IRF3-221ENST00000598808 AUTS2Q8WXX7 1259 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 FBXL18Q96ME1 805 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 MTMR12Q9C0I1 747 aa21.74■■□□□ 1.07
IRF3-221ENST00000598808 BICDL2A1A5D9 508 aa21.73■■□□□ 1.07
IRF3-221ENST00000598808 I3L4J1 428 aa21.73■■□□□ 1.07
IRF3-221ENST00000598808 CETN3O15182 167 aa21.73■■□□□ 1.07
IRF3-221ENST00000598808 PMS1P54277 932 aaKnown RBP21.73■■□□□ 1.07
IRF3-221ENST00000598808 NLRP12P59046 1061 aa21.73■■□□□ 1.07
IRF3-221ENST00000598808 LRRC63Q05C16 580 aa21.73■■□□□ 1.07
IRF3-221ENST00000598808 SMC1AQ14683 1233 aaKnown RBP21.73■■□□□ 1.07
IRF3-221ENST00000598808 EDRF1Q3B7T1 1238 aa21.73■■□□□ 1.07
IRF3-221ENST00000598808 ZCWPW2Q504Y3 356 aa21.73■■□□□ 1.07
IRF3-221ENST00000598808 FAM171A1Q5VUB5 890 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms