RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 TBC1D4O60343 1298 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 RHOBTB3O94955 611 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 HARSP12081 509 aaKnown RBP19.18■□□□□ 0.66
USHBP1-209ENST00000598570 HOXB8P17481 243 aaPredicted RBP19.18■□□□□ 0.66
USHBP1-209ENST00000598570 PAX3P23760 479 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 ACOT2P49753 483 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 MCCD1P59942 119 aaPredicted RBP19.18■□□□□ 0.66
USHBP1-209ENST00000598570 STK4Q13043 487 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 MRPL58Q14197 206 aaKnown RBP19.18■□□□□ 0.66
USHBP1-209ENST00000598570 KCNB1Q14721 858 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 KMT5BQ4FZB7 885 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 PPFIBP1Q86W92 1011 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 KIAA0895Q8NCT3 520 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 LNX1Q8TBB1 728 aaPredicted RBP19.18■□□□□ 0.66
USHBP1-209ENST00000598570 AUTS2Q8WXX7 1259 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 POMGNT1Q8WZA1 660 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 IGFLR1Q9H665 355 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 GOLGA2P5Q9HBQ8 144 aa19.18■□□□□ 0.66
USHBP1-209ENST00000598570 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.18■□□□□ 0.66
USHBP1-209ENST00000598570 UBQLN1Q9UMX0 589 aaKnown RBP19.18■□□□□ 0.66
USHBP1-209ENST00000598570 MTCL1Q9Y4B5 1905 aaKnown RBP19.17■□□□□ 0.66
USHBP1-209ENST00000598570 B3GAT3O94766 335 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 IL18RAPO95256 599 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 ANP32AP39687 249 aaKnown RBP19.17■□□□□ 0.66
USHBP1-209ENST00000598570 KCNQ1P51787 676 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 CLCN4P51793 760 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 FAM160A1Q05DH4 1040 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 PPP2R3AQ06190 1150 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 RTP2Q5QGT7 225 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 ANKRD54Q6NXT1 300 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 SYCE2Q6PIF2 218 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.17■□□□□ 0.66
USHBP1-209ENST00000598570 ZSWIM2Q8NEG5 633 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 CXorf38Q8TB03 319 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 HDAC7Q8WUI4 952 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 SUSD6Q92537 303 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 CBWD1Q9BRT8 395 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 TTPALQ9BTX7 342 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 RHOBTB2Q9BYZ6 727 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 HCFC2Q9Y5Z7 792 aa19.17■□□□□ 0.66
USHBP1-209ENST00000598570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.16■□□□□ 0.66
USHBP1-209ENST00000598570 PODXLO00592 558 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 PIRO00625 290 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 TEX28O15482 410 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 TRAPPC3O43617 180 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 RPN1P04843 607 aaKnown RBP19.16■□□□□ 0.66
USHBP1-209ENST00000598570 URODP06132 367 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 MATR3P43243 847 aaKnown RBP eCLIP19.16■□□□□ 0.66
USHBP1-209ENST00000598570 RBM10P98175 930 aaKnown RBP19.16■□□□□ 0.66
USHBP1-209ENST00000598570 CREMQ03060 361 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 SMAD2Q15796 467 aaKnown RBP19.16■□□□□ 0.66
USHBP1-209ENST00000598570 KNOP1Q1ED39 458 aaKnown RBP19.16■□□□□ 0.66
USHBP1-209ENST00000598570 PDXDC1Q6P996 788 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 SLC9A9Q8IVB4 645 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 BRSK2Q8IWQ3 736 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 SYCP3Q8IZU3 236 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 CASP10Q92851 521 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 SUSD3Q96L08 255 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 EMILIN2Q9BXX0 1053 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 KCTD10Q9H3F6 313 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 KIAA1586Q9HCI6 787 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 SLC39A2Q9NP94 309 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 AGPAT3Q9NRZ7 376 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 DMAC2Q9NW81 257 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 TUBGCP4Q9UGJ1 667 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 CD207Q9UJ71 328 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 BACE2Q9Y5Z0 518 aa19.16■□□□□ 0.66
USHBP1-209ENST00000598570 H3BQ06 376 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-209ENST00000598570 M0QZQ0 153 aa19.15■□□□□ 0.66
USHBP1-209ENST00000598570 SYN3O14994 580 aa19.15■□□□□ 0.66
USHBP1-209ENST00000598570 MBTPS2O43462 519 aa19.15■□□□□ 0.66
USHBP1-209ENST00000598570 PRR29P0C7W0 189 aa19.15■□□□□ 0.66
USHBP1-209ENST00000598570 WNT7BP56706 349 aa19.15■□□□□ 0.66
USHBP1-209ENST00000598570 SMAD4Q13485 552 aaKnown RBP19.15■□□□□ 0.66
USHBP1-209ENST00000598570 FAM171A1Q5VUB5 890 aa19.15■□□□□ 0.66
USHBP1-209ENST00000598570 JADE1Q6IE81 842 aa19.15■□□□□ 0.66
USHBP1-209ENST00000598570 KIF12Q96FN5 646 aa19.15■□□□□ 0.66
USHBP1-209ENST00000598570 CLSTN3Q9BQT9 956 aa19.15■□□□□ 0.66
USHBP1-209ENST00000598570 C5orf42Q9H799 3197 aa19.14■□□□□ 0.66
USHBP1-209ENST00000598570 XPOTO43592 962 aaKnown RBP19.14■□□□□ 0.65
USHBP1-209ENST00000598570 MYBPC2Q14324 1141 aa19.14■□□□□ 0.65
USHBP1-209ENST00000598570 COBLL1Q53SF7 1204 aa19.14■□□□□ 0.65
USHBP1-209ENST00000598570 PTCRAQ6ISU1 281 aaPredicted RBP19.14■□□□□ 0.65
USHBP1-209ENST00000598570 GPD1LQ8N335 351 aa19.14■□□□□ 0.65
USHBP1-209ENST00000598570 CMASQ8NFW8 434 aaPredicted RBP19.14■□□□□ 0.65
USHBP1-209ENST00000598570 FAM213AQ9BRX8 229 aa19.14■□□□□ 0.65
USHBP1-209ENST00000598570 COL25A1Q9BXS0 654 aaPredicted RBP19.14■□□□□ 0.65
USHBP1-209ENST00000598570 DZANK1Q9NVP4 752 aa19.14■□□□□ 0.65
USHBP1-209ENST00000598570 MTRRQ9UBK8 725 aa19.14■□□□□ 0.65
USHBP1-209ENST00000598570 PRKAG3Q9UGI9 489 aa19.14■□□□□ 0.65
USHBP1-209ENST00000598570 BARX2Q9UMQ3 279 aaPredicted RBP19.14■□□□□ 0.65
USHBP1-209ENST00000598570 MUC3AQ02505 3323 aa19.14■□□□□ 0.65
USHBP1-209ENST00000598570 TCF20Q9UGU0 1960 aaKnown RBP19.13■□□□□ 0.65
USHBP1-209ENST00000598570 C19orf67A6NJJ6 358 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 ADH1AP07327 375 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 NFICP08651 508 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 SRGAP2BP0DMP2 458 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 NDUFV1P49821 464 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 TMEM132DQ14C87 1099 aa19.13■□□□□ 0.65
USHBP1-209ENST00000598570 NFIL3Q16649 462 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms