RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 FUCA2Q9BTY2 467 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 PLVAPQ9BX97 442 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 INTS13Q9NVM9 706 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 ARMCX3Q9UH62 379 aaPredicted RBP23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 GNA14O95837 355 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 TNNC2P02585 160 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 RB1P06400 928 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 RPL9P32969 192 aaKnown RBP23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 PPM1AP35813 382 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 DLG4P78352 724 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 BFSP1Q12934 665 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 SLC39A11Q8N1S5 342 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 TMEM130Q8N3G9 435 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 KLHL23Q8NBE8 558 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 ENOX1Q8TC92 643 aaKnown RBP23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 MTMR12Q9C0I1 747 aa23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 METTL14Q9HCE5 456 aaKnown RBP23.92■■□□□ 1.42
CHMP2A-204ENST00000597848 RANBP2P49792 3224 aaKnown RBP23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 PTPRJQ12913 1337 aa23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 LRRIQ3A6PVS8 624 aaPredicted RBP23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 PODXLO00592 558 aa23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 ZNF697Q5TEC3 545 aa23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 DCLRE1AQ6PJP8 1040 aa23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 FRMD5Q7Z6J6 570 aa23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 OR5B17Q8NGF7 314 aa23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 BORCS6Q96GS4 357 aa23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 C11orf84Q9BUA3 381 aaPredicted RBP23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 R3HCC1Q9Y3T6 440 aaKnown RBP23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 TRIP11Q15643 1979 aa23.91■■□□□ 1.42
CHMP2A-204ENST00000597848 TDRD15B5MCY1 1934 aaKnown RBP23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 TMEM265A0A087WTH1 108 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 TADA2AO75478 443 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 FGF18O76093 207 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 B3GAT3O94766 335 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 TRIM49P0CI25 452 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 TRIM49CP0CI26 452 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 LRPAP1P30533 357 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 KRT17Q04695 432 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 UPP1Q16831 310 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 DCAF17Q5H9S7 520 aaPredicted RBP23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 TCERG1LQ5VWI1 586 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 ZNF516Q92618 1163 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 TMEM169Q96HH4 297 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 IGSF21Q96ID5 467 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 THAP9Q9H5L6 903 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 NFE2L3Q9Y4A8 694 aa23.9■■□□□ 1.42
CHMP2A-204ENST00000597848 C5orf67F2Z3F1 127 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 F8W810 466 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 IKBKBO14920 756 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 PHACTR2O75167 634 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 KRT19P08727 400 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 ZNF165P49910 485 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 AP3M2P53677 418 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 BIRC3Q13489 604 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 GPM6BQ13491 265 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 C9orf57Q5W0N0 161 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 TMEM173Q86WV6 379 aaPredicted RBP23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 FAM114A1Q8IWE2 563 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 HASPINQ8TF76 798 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 MMRN2Q9H8L6 949 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 ALG13Q9NP73 1137 aaKnown RBP23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 MAGEC2Q9UBF1 373 aaPredicted RBP23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 RALGAPA2Q2PPJ7 1873 aa23.89■■□□□ 1.41
CHMP2A-204ENST00000597848 STX10O60499 249 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 KIF4AO95239 1232 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 ITGB3P05106 788 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 ITGB1P05556 798 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 CLDN10P78369 228 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 RBP5P82980 135 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 MYL5Q02045 173 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 ENPEPQ07075 957 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 HSP90AA4PQ58FG1 418 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 TRAPPC11Q7Z392 1133 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 AOPEPQ8N6M6 819 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 C1orf127Q8N9H9 656 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 BCL7CQ8WUZ0 217 aaPredicted RBP23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 CNOT6LQ96LI5 555 aaKnown RBP23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 TTYH1Q9H313 450 aaPredicted RBP23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 MARCH5Q9NX47 278 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 PUF60Q9UHX1 559 aaKnown RBP23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 ADAM28Q9UKQ2 775 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 ITGA11Q9UKX5 1188 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 AGAP1Q9UPQ3 857 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 NUB1Q9Y5A7 615 aa23.88■■□□□ 1.41
CHMP2A-204ENST00000597848 H3BNC9 293 aa23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 PPEF2O14830 753 aa23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 IGFBP6P24592 240 aaPredicted RBP23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 POLR2BP30876 1174 aaKnown RBP23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 GCLMP48507 274 aa23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 PLCB3Q01970 1234 aa23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 C1orf220Q5T0J3 134 aa23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 FAM161BQ96MY7 647 aa23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 BPIFA3Q9BQP9 254 aa23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 SAMSN1Q9NSI8 373 aaKnown RBP23.87■■□□□ 1.41
CHMP2A-204ENST00000597848 ANK1P16157 1881 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 ANO9A1A5B4 782 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 EPOPA6NHQ4 379 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 SMTNL1A8MU46 457 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 RFXAPO00287 272 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 PIRO00625 290 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms