RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 CST3P01034 146 aaPredicted RBP16.78■□□□□ 0.28
SMCO4-206ENST00000596676 BMPR1AP36894 532 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 ZNF165P49910 485 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 ERVK-21P61565 698 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 POU5F1Q01860 360 aaKnown RBP16.78■□□□□ 0.28
SMCO4-206ENST00000596676 BFSP1Q12934 665 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 IQCB1Q15051 598 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 EPC2Q52LR7 807 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
SMCO4-206ENST00000596676 CT47A1Q5JQC4 288 aaPredicted RBP16.78■□□□□ 0.28
SMCO4-206ENST00000596676 LRSAM1Q6UWE0 723 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 CXorf38Q8TB03 319 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 TMC2Q8TDI7 906 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 ARNTL2Q8WYA1 636 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 CNOT6LQ96LI5 555 aaKnown RBP16.78■□□□□ 0.28
SMCO4-206ENST00000596676 ZNF558Q96NG5 402 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 FNBP1Q96RU3 617 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 MKNK1Q9BUB5 465 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 HSD3B7Q9H2F3 369 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 TTYH1Q9H313 450 aaPredicted RBP16.78■□□□□ 0.28
SMCO4-206ENST00000596676 CBX8Q9HC52 389 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 MARCH5Q9NX47 278 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 SIX4Q9UIU6 781 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 UBQLN1Q9UMX0 589 aaKnown RBP16.78■□□□□ 0.28
SMCO4-206ENST00000596676 FAN1Q9Y2M0 1017 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 DERAQ9Y315 318 aa16.78■□□□□ 0.28
SMCO4-206ENST00000596676 I3L4J1 428 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 PODXLO00592 558 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 MAPK13O15264 365 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 CSPG5O95196 566 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 KIF4AO95239 1232 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 ALDH2P05091 517 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 ITGB3P05106 788 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 KRT13P13646 458 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 GCLMP48507 274 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 UPP1Q16831 310 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 TDRD10Q5VZ19 366 aaKnown RBP16.77■□□□□ 0.28
SMCO4-206ENST00000596676 TAS1R1Q7RTX1 841 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 FRMD5Q7Z6J6 570 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 WDR49Q8IV35 697 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 SLC39A11Q8N1S5 342 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 BEST2Q8NFU1 509 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 TGS1Q96RS0 853 aaKnown RBP16.77■□□□□ 0.28
SMCO4-206ENST00000596676 VN1R3Q9BXE9 311 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 ALG13Q9NP73 1137 aaKnown RBP16.77■□□□□ 0.28
SMCO4-206ENST00000596676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.77■□□□□ 0.28
SMCO4-206ENST00000596676 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 ARMCX3Q9UH62 379 aaPredicted RBP16.77■□□□□ 0.28
SMCO4-206ENST00000596676 C2CD2Q9Y426 696 aa16.77■□□□□ 0.28
SMCO4-206ENST00000596676 SCN1AP35498 2009 aa16.77■□□□□ 0.27
SMCO4-206ENST00000596676 PLXNA4Q9HCM2 1894 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 SPTLC1O15269 473 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 VNN1O95497 513 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 C4BPAP04003 597 aaKnown RBP16.76■□□□□ 0.27
SMCO4-206ENST00000596676 TMEM191BP0C7N4 346 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 LAG3P18627 525 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 DNAJB1P25685 340 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 BRCC3P46736 316 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 ALDH7A1P49419 539 aaKnown RBP16.76■□□□□ 0.27
SMCO4-206ENST00000596676 CLDN10P78369 228 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 MYL5Q02045 173 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 HSP90AA2PQ14568 343 aaPredicted RBP16.76■□□□□ 0.27
SMCO4-206ENST00000596676 SURF1Q15526 300 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 DUOXA2Q1HG44 320 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 C9orf57Q5W0N0 161 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 INTS8Q75QN2 995 aaKnown RBP16.76■□□□□ 0.27
SMCO4-206ENST00000596676 TRAPPC11Q7Z392 1133 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 LUZP1Q86V48 1076 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 TRIM59Q8IWR1 403 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 ANKRD36BP1Q96IX9 119 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 FAM161BQ96MY7 647 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 TMEM175Q9BSA9 504 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 TSPY26PQ9H489 355 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 THAP9Q9H5L6 903 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 AGAP1Q9UPQ3 857 aa16.76■□□□□ 0.27
SMCO4-206ENST00000596676 ANO9A1A5B4 782 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 GRM6O15303 877 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 FGF18O76093 207 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 TNNC2P02585 160 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 KRT19P08727 400 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 CYP3A5P20815 502 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 LRPAP1P30533 357 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 POLR2BP30876 1174 aaKnown RBP16.75■□□□□ 0.27
SMCO4-206ENST00000596676 ZNF445P59923 1031 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 MCCD1P59942 119 aaPredicted RBP16.75■□□□□ 0.27
SMCO4-206ENST00000596676 CBWD6Q4V339 395 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 CBWD3Q5JTY5 395 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 CBWD5Q5RIA9 395 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 CDKAL1Q5VV42 579 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 SV2AQ7L0J3 742 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 GDPD5Q8WTR4 605 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
SMCO4-206ENST00000596676 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 IGSF21Q96ID5 467 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 B3GALT6Q96L58 329 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 BPIFA3Q9BQP9 254 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 GPR62Q9BZJ7 368 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 ZNF576Q9H609 170 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms