RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 UBE3AQ05086 875 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 CAMK1Q14012 370 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 PSMD6Q15008 389 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 ZSCAN23Q3MJ62 389 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 DCLRE1AQ6PJP8 1040 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 TMEM130Q8N3G9 435 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 EEF2KMTQ96G04 330 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 PUF60Q9UHX1 559 aaKnown RBP20.93■□□□□ 0.94
PNKP-207ENST00000596014 LZTS1Q9Y250 596 aa20.93■□□□□ 0.94
PNKP-207ENST00000596014 AKAP3O75969 853 aa20.92■□□□□ 0.94
PNKP-207ENST00000596014 IGFBP6P24592 240 aaPredicted RBP20.92■□□□□ 0.94
PNKP-207ENST00000596014 GUCY2FP51841 1108 aa20.92■□□□□ 0.94
PNKP-207ENST00000596014 FKBP3Q00688 224 aaKnown RBP20.92■□□□□ 0.94
PNKP-207ENST00000596014 DPCR1Q3MIW9 517 aa20.92■□□□□ 0.94
PNKP-207ENST00000596014 BEST2Q8NFU1 509 aa20.92■□□□□ 0.94
PNKP-207ENST00000596014 MYLIPQ8WY64 445 aa20.92■□□□□ 0.94
PNKP-207ENST00000596014 CCDC127Q96BQ5 260 aa20.92■□□□□ 0.94
PNKP-207ENST00000596014 GAS2L1Q99501 681 aaPredicted RBP20.92■□□□□ 0.94
PNKP-207ENST00000596014 CTNND2Q9UQB3 1225 aa20.92■□□□□ 0.94
PNKP-207ENST00000596014 CETN3O15182 167 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 MAPK13O15264 365 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 TADA2AO75478 443 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 B3GAT3O94766 335 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 KIF4AO95239 1232 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 LRPAP1P30533 357 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 MRE11P49959 708 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 TFAMQ00059 246 aaKnown RBP20.91■□□□□ 0.94
PNKP-207ENST00000596014 PAK1Q13153 545 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 TTI2Q6NXR4 508 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 FOXR2Q6PJQ5 311 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 DDX53Q86TM3 631 aaKnown RBP20.91■□□□□ 0.94
PNKP-207ENST00000596014 ZC3H3Q8IXZ2 948 aaKnown RBP20.91■□□□□ 0.94
PNKP-207ENST00000596014 CACTINQ8WUQ7 758 aaKnown RBP20.91■□□□□ 0.94
PNKP-207ENST00000596014 SYAP1Q96A49 352 aaPredicted RBP20.91■□□□□ 0.94
PNKP-207ENST00000596014 VN1R3Q9BXE9 311 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 LMAN2LQ9H0V9 348 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 DPP3Q9NY33 737 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 ADAM28Q9UKQ2 775 aa20.91■□□□□ 0.94
PNKP-207ENST00000596014 BICDL2A1A5D9 508 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 TMEM189-UBE2V1I3L0A0 370 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 PODXLO00592 558 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 EFEMP2O95967 443 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 DLATP10515 647 aaKnown RBP20.9■□□□□ 0.94
PNKP-207ENST00000596014 POU3F3P20264 500 aaPredicted RBP20.9■□□□□ 0.94
PNKP-207ENST00000596014 PSMC2P35998 433 aaKnown RBP20.9■□□□□ 0.94
PNKP-207ENST00000596014 STX17P56962 302 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 PTPROQ16827 1216 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 CD300LGQ6UXG3 332 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 C3orf58Q8NDZ4 430 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 HASPINQ8TF76 798 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 FNBP1Q96RU3 617 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 POP1Q99575 1024 aaKnown RBP20.9■□□□□ 0.94
PNKP-207ENST00000596014 DUSP9Q99956 384 aaKnown RBP20.9■□□□□ 0.94
PNKP-207ENST00000596014 GRPEL1Q9HAV7 217 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 INTS13Q9NVM9 706 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 LMCD1Q9NZU5 365 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 ATG2AQ2TAZ0 1938 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 PTPRJQ12913 1337 aa20.9■□□□□ 0.94
PNKP-207ENST00000596014 IGFBP4P22692 258 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 ERVFC1P60507 584 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 LMBRD2Q68DH5 695 aaPredicted RBP20.89■□□□□ 0.94
PNKP-207ENST00000596014 GAS2L3Q86XJ1 694 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 WDR49Q8IV35 697 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 FAM186BQ8IYM0 893 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 PLEKHO2Q8TD55 490 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 PARD3BQ8TEW8 1205 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 MRPL38Q96DV4 380 aaKnown RBP20.89■□□□□ 0.94
PNKP-207ENST00000596014 FAM84AQ96KN4 292 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 TLR9Q9NR96 1032 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 MTCH2Q9Y6C9 303 aa20.89■□□□□ 0.94
PNKP-207ENST00000596014 SCN1AP35498 2009 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 REV3LO60673 3130 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 TNNI1P19237 187 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 DUOXA2Q1HG44 320 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 FUT10Q6P4F1 479 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 SASS6Q6UVJ0 657 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 VPS52Q8N1B4 723 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 OR5B17Q8NGF7 314 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 MKNK1Q9BUB5 465 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 GPR62Q9BZJ7 368 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 RWDD2AQ9UIY3 292 aa20.89■□□□□ 0.93
PNKP-207ENST00000596014 ANO9A1A5B4 782 aa20.88■□□□□ 0.93
PNKP-207ENST00000596014 PIRO00625 290 aa20.88■□□□□ 0.93
PNKP-207ENST00000596014 CSPG5O95196 566 aa20.88■□□□□ 0.93
PNKP-207ENST00000596014 C9orf57Q5W0N0 161 aa20.88■□□□□ 0.93
PNKP-207ENST00000596014 RNF168Q8IYW5 571 aaPredicted RBP20.88■□□□□ 0.93
PNKP-207ENST00000596014 MED15Q96RN5 788 aa20.88■□□□□ 0.93
PNKP-207ENST00000596014 CGRRF1Q99675 332 aa20.88■□□□□ 0.93
PNKP-207ENST00000596014 MTMR12Q9C0I1 747 aa20.88■□□□□ 0.93
PNKP-207ENST00000596014 STK39Q9UEW8 545 aa20.88■□□□□ 0.93
PNKP-207ENST00000596014 DACH1Q9UI36 760 aa20.88■□□□□ 0.93
PNKP-207ENST00000596014 PPEF2O14830 753 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 SOD2P04179 222 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 TMEM191BP0C7N4 346 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 IRS1P35568 1242 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 CLDN10P78369 228 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 INTS8Q75QN2 995 aaKnown RBP20.87■□□□□ 0.93
PNKP-207ENST00000596014 TAS1R1Q7RTX1 841 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 CSGALNACT2Q8N6G5 542 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 C1orf127Q8N9H9 656 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms