RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 NUCB2P80303 420 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 E2F4Q16254 413 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 CCDC73Q6ZRK6 1079 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 GLYCTKQ8IVS8 523 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 SPATA32Q96LK8 384 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 PDZD7Q9H5P4 517 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 PARP2Q9UGN5 583 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 NOTCH4Q99466 2003 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 PATJQ8NI35 1801 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 CCDC169A6NNP5 214 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 LMNAP02545 664 aaKnown RBP17.45■□□□□ 0.38
USHBP1-205ENST00000595993 PRKCBP05771 671 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 PLS3P13797 630 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 LIG1P18858 919 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 FSHRP23945 695 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 ID4P47928 161 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 DMP1Q13316 513 aaPredicted RBP17.45■□□□□ 0.38
USHBP1-205ENST00000595993 RESP18Q5W5W9 173 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 DCLRE1AQ6PJP8 1040 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 TAS1R3Q7RTX0 852 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 PJA1Q8NG27 643 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 FGF14Q92915 247 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 TTPALQ9BTX7 342 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 DDX23Q9BUQ8 820 aaKnown RBP17.45■□□□□ 0.38
USHBP1-205ENST00000595993 CXCL16Q9H2A7 254 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 GDPD2Q9HCC8 539 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 ARHGAP28Q9P2N2 729 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 CDH7Q9ULB5 785 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 ODF2LQ9ULJ1 636 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 SIT1Q9Y3P8 196 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 ATP6V1DQ9Y5K8 247 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 PHLPP2Q6ZVD8 1323 aa17.45■□□□□ 0.38
USHBP1-205ENST00000595993 MYMKA6NI61 221 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 N4BP3O15049 544 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 SLC16A4O15374 487 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 GLULP15104 373 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 ANP32AP39687 249 aaKnown RBP17.44■□□□□ 0.38
USHBP1-205ENST00000595993 ZNF131P52739 623 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 PSMD5Q16401 504 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 MAPK6Q16659 721 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 FAM171A1Q5VUB5 890 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 GRASPQ7Z6J2 395 aaPredicted RBP17.44■□□□□ 0.38
USHBP1-205ENST00000595993 DHX58Q96C10 678 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 RPP25Q9BUL9 199 aaKnown RBP17.44■□□□□ 0.38
USHBP1-205ENST00000595993 C17orf75Q9HAS0 396 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 KMT5AQ9NQR1 393 aa17.44■□□□□ 0.38
USHBP1-205ENST00000595993 MIA3Q5JRA6 1907 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 COL4A3Q01955 1670 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 CASTOR2A6NHX0 329 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 TMEM189-UBE2V1I3L0A0 370 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 STK25O00506 426 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 ACKR2O00590 384 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 ADAM12O43184 909 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 RECQL4O94761 1208 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 THP07101 528 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 C8AP07357 584 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 DCNP07585 359 aaKnown RBP17.43■□□□□ 0.38
USHBP1-205ENST00000595993 SP9P0CG40 484 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 EFNA5P52803 228 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 ELAVL2Q12926 359 aaKnown RBP17.43■□□□□ 0.38
USHBP1-205ENST00000595993 PRPF4BQ13523 1007 aaKnown RBP17.43■□□□□ 0.38
USHBP1-205ENST00000595993 RAB33AQ14088 237 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 NT5DC1Q5TFE4 455 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 EEF1DP3Q658K8 133 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 PDXDC1Q6P996 788 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 PARM1Q6UWI2 310 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 RTL10Q7L3V2 364 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 DYMQ7RTS9 669 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 C1orf210Q8IVY1 113 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 MAML2Q8IZL2 1156 aaPredicted RBP17.43■□□□□ 0.38
USHBP1-205ENST00000595993 TMEM161BQ8NDZ6 487 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 HASPINQ8TF76 798 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 SPIRE2Q8WWL2 714 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 DNAJC19Q96DA6 116 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 FIZ1Q96SL8 496 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 NTPCRQ9BSD7 190 aaKnown RBP17.43■□□□□ 0.38
USHBP1-205ENST00000595993 SNTG2Q9NY99 539 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 R4GN57 208 aa17.43■□□□□ 0.38
USHBP1-205ENST00000595993 KRT18P05783 430 aaKnown RBP17.42■□□□□ 0.38
USHBP1-205ENST00000595993 FGFR3P22607 806 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 NCKAP1LP55160 1127 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 GPC5P78333 572 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 NTHL1P78549 312 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 LIN9Q5TKA1 542 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.42■□□□□ 0.38
USHBP1-205ENST00000595993 MTSS1LQ765P7 747 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 SV2BQ7L1I2 683 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 DDX12PQ92771 950 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 FGF13Q92913 245 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 TMEM134Q9H6X4 195 aa17.42■□□□□ 0.38
USHBP1-205ENST00000595993 K7ERI5 159 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 POLR2DO15514 142 aaKnown RBP17.41■□□□□ 0.38
USHBP1-205ENST00000595993 TBCAO75347 108 aaKnown RBP17.41■□□□□ 0.38
USHBP1-205ENST00000595993 FAM13AO94988 1023 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 MAPTP10636 758 aaKnown RBP17.41■□□□□ 0.38
USHBP1-205ENST00000595993 RFX1P22670 979 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 UVSSAQ2YD98 709 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 PPM1LQ5SGD2 360 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 ADALQ6DHV7 355 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 ZC3H14Q6PJT7 736 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms