RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 LRRC53A6NM62 1247 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 C9IYK1 514 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 ASS1P00966 412 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 CST3P01034 146 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 CLTBP09497 229 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 SKIP12755 728 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 ITGA4P13612 1032 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 NCOA4Q13772 614 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 WDR59Q6PJI9 974 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 AGMOQ6ZNB7 445 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 RRAGAQ7L523 313 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 CACNA2D4Q7Z3S7 1137 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 ECHDC2Q86YB7 292 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 HACE1Q8IYU2 909 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 TATDN2Q93075 761 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 KIF12Q96FN5 646 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 FTHL17Q9BXU8 183 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 STK33Q9BYT3 514 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 GPR88Q9GZN0 384 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 NUCKS1Q9H1E3 243 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 TSPYL2Q9H2G4 693 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 APOBEC3GQ9HC16 384 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 PARP2Q9UGN5 583 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 GIT1Q9Y2X7 761 aa15.89■□□□□ 0.13
SHKBP1-211ENST00000595945 SMIM28A0A1B0GU29 152 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 MEIS3P2A8K0S8 358 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 TULP1O00294 542 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 KIAA0355O15063 1070 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 INPPL1O15357 1258 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 PHACTR2O75167 634 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 EN2P19622 333 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 CYP2C18P33260 490 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 CDK17Q00537 523 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 GCNT1Q02742 428 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 TCTN1Q2MV58 587 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 DBF4BQ8NFT6 615 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 SEPT8Q92599 483 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 APBB2Q92870 758 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 VWCEQ96DN2 955 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 SCLYQ96I15 445 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 KREMEN1Q96MU8 473 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 BAG1Q99933 345 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 PI4K2AQ9BTU6 479 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 XYLT2Q9H1B5 865 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 UBE2TQ9NPD8 197 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 TMEM39AQ9NV64 488 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 DPP3Q9NY33 737 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 AIPL1Q9NZN9 384 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 KLK14Q9P0G3 267 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 ITGA11Q9UKX5 1188 aa15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 UBQLN1Q9UMX0 589 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 FNDC1Q4ZHG4 1894 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-211ENST00000595945 PTGESO14684 152 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 STAU1O95793 577 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 SKILP12757 684 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 CYP3A5P20815 502 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 GUCY2FP51841 1108 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 MYL6P60660 151 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 DRAP1Q14919 205 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 WDR44Q5JSH3 913 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 SMYD5Q6GMV2 418 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 SPOPLQ6IQ16 392 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 SLC24A5Q71RS6 500 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 TMEM130Q8N3G9 435 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 GSTCDQ8NEC7 633 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 TAF4BQ92750 862 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 KAT5Q92993 513 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 LPPQ93052 612 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 PGBD4Q96DM1 585 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 FAM81BQ96LP2 452 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 PPP1R10Q96QC0 940 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 PPP1R12CQ9BZL4 782 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 VRTNQ9H8Y1 702 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 C1orf112Q9NSG2 853 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 ZKSCAN5Q9Y2L8 839 aa15.87■□□□□ 0.13
SHKBP1-211ENST00000595945 TRIM43BA6NCK2 446 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 F8VZ95 297 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 EOMESO95936 686 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 ATICP31939 592 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 RFC2P35250 354 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 STAT1P42224 750 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 CCL23P55773 120 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 NOP14P78316 857 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 TRPC3Q13507 836 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 RAPGEF1Q13905 1077 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 NAB2Q15742 525 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 SGSM1Q2NKQ1 1148 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 SFMBT2Q5VUG0 894 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 HGSNATQ68CP4 663 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 IRF2BP2Q7Z5L9 587 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 TMTC1Q8IUR5 882 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 UBR7Q8N806 425 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 BEST2Q8NFU1 509 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 SHC3Q92529 594 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 C18orf25Q96B23 403 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 ELMO3Q96BJ8 720 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 TRIM43Q96BQ3 446 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 FAXDC2Q96IV6 333 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 SPAG5Q96R06 1193 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms