RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 PDE11AQ9HCR9 933 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 NGRNQ9NPE2 291 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 LMBRD1Q9NUN5 540 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 CLDND1Q9NY35 253 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 MAN1B1Q9UKM7 699 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 UBQLN1Q9UMX0 589 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 C2orf16Q68DN1 1984 aa14.96□□□□□ -0.01
SHKBP1-207ENST00000595631 SF3B1O75533 1304 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 PTPRJQ12913 1337 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 TMEM189-UBE2V1I3L0A0 370 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 LILRB3O75022 631 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 CLASP2O75122 1294 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 TBX10O75333 385 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 IL18RAPO95256 599 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 SMC2O95347 1197 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 URODP06132 367 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 LTBRP36941 435 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 GLUD2P49448 558 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 CAMK4Q16566 473 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 KIAA0319Q5VV43 1072 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 SPATA1Q5VX52 437 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 LMBRD2Q68DH5 695 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 LLGL2Q6P1M3 1020 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 PRSS55Q6UWB4 352 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 CD302Q8IX05 232 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 SPATA20Q8TB22 786 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 RIN2Q8WYP3 895 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 DDX27Q96GQ7 796 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 FBXL18Q96ME1 805 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 ASB7Q9H672 318 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 CHST7Q9NS84 486 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 HOOK1Q9UJC3 728 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 PRUNE2Q8WUY3 3088 aa14.95□□□□□ -0.02
SHKBP1-207ENST00000595631 BIN1O00499 593 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 KIAA0391O15091 583 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 CNPP09543 421 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 RPL17P18621 184 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 CYP3A5P20815 502 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 KCNA5P22460 613 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 LRPAP1P30533 357 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 RPL9P32969 192 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 PRCPP42785 496 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 SNRPFP62306 86 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 DSG1Q02413 1049 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 COL19A1Q14993 1142 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 SNRNP35Q16560 246 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 CTC1Q2NKJ3 1217 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 USP41Q3LFD5 358 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 KIAA1841Q6NSI8 718 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 CEP57Q86XR8 500 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 GLYCTKQ8IVS8 523 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 C12orf56Q8IXR9 622 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 ELOA2Q8IYF1 753 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 GUF1Q8N442 669 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 XXYLT1Q8NBI6 393 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 BEST2Q8NFU1 509 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 HLA-CQ95604 372 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 PPP2R3CQ969Q6 453 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 PABPC5Q96DU9 382 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 GBP4Q96PP9 640 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 KLHL5Q96PQ7 755 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 GSDMAQ96QA5 445 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 MRPL17Q9NRX2 175 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 RMND1Q9NWS8 449 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 DPP3Q9NY33 737 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 THEGQ9P2T0 379 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 DERAQ9Y315 318 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 C2CD2Q9Y426 696 aa14.94□□□□□ -0.02
SHKBP1-207ENST00000595631 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 ZNF233A6NK53 670 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 H3BQ06 376 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 PDXKO00764 312 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 XPOTO43592 962 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 EXOC3O60645 756 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 NR3C1P04150 777 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 TKTP29401 623 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 MCM4P33991 863 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 CASP4P49662 377 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 TFAMQ00059 246 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 POU5F1Q01860 360 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 CYP24A1Q07973 514 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 ADAM15Q13444 863 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 CLUL1Q15846 466 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 C9orf57Q5W0N0 161 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 EFHBQ8N7U6 833 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 DMAC2Q9NW81 257 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 CGNQ9P2M7 1197 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 BARX2Q9UMQ3 279 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 NUB1Q9Y5A7 615 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 IRAK3Q9Y616 596 aa14.93□□□□□ -0.02
SHKBP1-207ENST00000595631 TEX28O15482 410 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 CD44P16070 742 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 EPCAMP16422 314 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 BMP6P22004 513 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 FGFR3P22607 806 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 NDUFV1P49821 464 aa14.92□□□□□ -0.02
SHKBP1-207ENST00000595631 KCNQ1P51787 676 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms