RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 EXTL3O43909 919 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 KIF4AO95239 1232 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 TMEM253P0C7T8 217 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 POTEJP0CG39 1038 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 HARSP12081 509 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 SSR1P43307 286 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 GPC3P51654 580 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 WNT7BP56706 349 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 ERVK-9P63128 1117 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 SNAPC2Q13487 334 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 TARBP2Q15633 366 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 PRPF31Q8WWY3 499 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 CCT6BQ92526 530 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 DHX38Q92620 1227 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 SPDL1Q96EA4 605 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 NT5C1BQ96P26 610 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 SLC12A6Q9UHW9 1150 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 NFU1Q9UMS0 254 aa18.25■□□□□ 0.51
SHKBP1-205ENST00000594973 GLTPD2A6NH11 291 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 EDN1P05305 212 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 TNNI1P19237 187 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 HSPA9P38646 679 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 RFC5P40937 340 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 CARSP49589 748 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 BIRC3Q13489 604 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 PRPF4BQ13523 1007 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 CAPSQ13938 189 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 SPRED3Q2MJR0 410 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 ZBTB41Q5SVQ8 909 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 NOP9Q86U38 636 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 FAM71AQ8IYT1 594 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 HELQQ8TDG4 1101 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 RFFLQ8WZ73 363 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 SPATA33Q96N06 139 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 FNBP1Q96RU3 617 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 GPR20Q99678 358 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 COQ4Q9Y3A0 265 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 DNAJC25-GNG10A0A024R161 153 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 BUB1BO60566 1050 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 FAM153BP0C7A2 387 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 ABCD1P33897 745 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 MCCD1P59942 119 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 FAM153CQ494X1 144 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 SEZ6Q53EL9 994 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 CELF3Q5SZQ8 465 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 CCDC26Q8TAB7 109 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 EPS8L1Q8TE68 723 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 PSPC1Q8WXF1 523 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 ZNF516Q92618 1163 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 PDGFCQ9NRA1 345 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 CHORDC1Q9UHD1 332 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 FAM153AQ9UHL3 310 aa18.24■□□□□ 0.51
SHKBP1-205ENST00000594973 LIN7AO14910 233 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 FTLP02792 175 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 GSTA1P08263 222 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 RBBP5Q15291 538 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 GPR162Q16538 588 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 GKAP1Q5VSY0 366 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 MAP1SQ66K74 1059 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 LRRC71Q8N4P6 559 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 NSMCE1Q8WV22 266 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 SHC3Q92529 594 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 VTI1AQ96AJ9 217 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 MSTO1Q9BUK6 570 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 MROH8Q9H579 483 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 C15orf41Q9Y2V0 281 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 ATP8B3O60423 1300 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 CEP104O60308 925 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 MAFO75444 373 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 GLI1P08151 1106 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 SRGAP2CP0DJJ0 459 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 TXNP10599 105 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 GTF2H1P32780 548 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 COPB2P35606 906 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 BYSLQ13895 437 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 LDLRAD1Q5T700 205 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 PCDHB18PQ96TA0 734 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 KIF9Q9HAQ2 790 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 TRPC6Q9Y210 931 aa18.23■□□□□ 0.51
SHKBP1-205ENST00000594973 ANKRD62A6NC57 917 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 TTLL13PA6NNM8 815 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 MYZAPP0CAP1 466 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 KRT5P13647 590 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 ACCSLQ4AC99 568 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 BZW1Q7L1Q6 419 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 SLFN11Q7Z7L1 901 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 SYCE1Q8N0S2 351 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 ZNF668Q96K58 619 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 KIAA1586Q9HCI6 787 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 EPB41L5Q9HCM4 733 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 RBAKQ9NYW8 714 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 NOCTQ9UK39 431 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 COG5Q9UP83 839 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 PLAAQ9Y263 795 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 NCANO14594 1321 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 PTPRJQ12913 1337 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 ADCY3O60266 1144 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 HEXIM1O94992 359 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 CALCAP01258 141 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 MMEP08473 750 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms