RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, human

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDLRAD4-218	ENST00000592991	WDR59	Q6PJI9	974 aa		27.58	■■■□□ 2.01
LDLRAD4-218	ENST00000592991	C18orf25	Q96B23	403 aa	Predicted RBP	27.58	■■■□□ 2.01
LDLRAD4-218	ENST00000592991	ZFP42	Q96MM3	310 aa		27.58	■■■□□ 2.01
LDLRAD4-218	ENST00000592991	NT5C1B	Q96P26	610 aa		27.58	■■■□□ 2.01
LDLRAD4-218	ENST00000592991	APOBEC3G	Q9HC16	384 aa	Known RBP	27.58	■■■□□ 2.01
LDLRAD4-218	ENST00000592991	TMEM39A	Q9NV64	488 aa		27.58	■■■□□ 2.01
LDLRAD4-218	ENST00000592991	TUBGCP4	Q9UGJ1	667 aa		27.58	■■■□□ 2.01
LDLRAD4-218	ENST00000592991	KRT19	P08727	400 aa		27.57	■■■□□ 2
LDLRAD4-218	ENST00000592991	CLTB	P09497	229 aa		27.57	■■■□□ 2
LDLRAD4-218	ENST00000592991	ITGA4	P13612	1032 aa		27.57	■■■□□ 2
LDLRAD4-218	ENST00000592991	PPM1K	Q8N3J5	372 aa		27.57	■■■□□ 2
LDLRAD4-218	ENST00000592991	DBF4B	Q8NFT6	615 aa		27.57	■■■□□ 2
LDLRAD4-218	ENST00000592991	KREMEN1	Q96MU8	473 aa		27.57	■■■□□ 2
LDLRAD4-218	ENST00000592991	SPAG5	Q96R06	1193 aa		27.57	■■■□□ 2
LDLRAD4-218	ENST00000592991	CHP1	Q99653	195 aa		27.57	■■■□□ 2
LDLRAD4-218	ENST00000592991	C2CD2	Q9Y426	696 aa		27.57	■■■□□ 2
LDLRAD4-218	ENST00000592991	ITGB3	P05106	788 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	MLH1	P40692	756 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	AFF1	P51825	1210 aa	Known RBP	27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	JAM2	P57087	298 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	AGMO	Q6ZNB7	445 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	CD302	Q8IX05	232 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	HELQ	Q8TDG4	1101 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	GPR88	Q9GZN0	384 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	FBXL5	Q9UKA1	691 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	SOWAHD	A6NJG2	315 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	ARID5A	Q03989	594 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	TRPC3	Q13507	836 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	DRAP1	Q14919	205 aa	Predicted RBP	27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	PLEKHG4	Q58EX7	1191 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	CXorf38	Q8TB03	319 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991	PLAGL2	Q9UPG8	496 aa		27.56	■■■□□ 2
LDLRAD4-218	ENST00000592991		A0A0U1RQF3	1178 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	SMIM28	A0A1B0GU29	152 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	POLR2B	P30876	1174 aa	Known RBP	27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	NOP14	P78316	857 aa	Known RBP	27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	MTF1	Q14872	753 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	XKR4	Q5GH76	650 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	WDR44	Q5JSH3	913 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	DEFB128	Q7Z7B8	93 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	MRPL10	Q7Z7H8	261 aa	Known RBP	27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	GAD1	Q99259	594 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	ARID3A	Q99856	593 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	TRAIP	Q9BWF2	469 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	PRDM5	Q9NQX1	630 aa	Predicted RBP	27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	RGS18	Q9NS28	235 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	C1orf112	Q9NSG2	853 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	DPP3	Q9NY33	737 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	ZKSCAN5	Q9Y2L8	839 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991	NUB1	Q9Y5A7	615 aa		27.55	■■■□□ 2
LDLRAD4-218	ENST00000592991		F8VZ95	297 aa		27.54	■■■□□ 2
LDLRAD4-218	ENST00000592991	PTGES	O14684	152 aa		27.54	■■■□□ 2
LDLRAD4-218	ENST00000592991	FECH	P22830	423 aa		27.54	■■■□□ 2
LDLRAD4-218	ENST00000592991	RAB27A	P51159	221 aa		27.54	■■■□□ 2
LDLRAD4-218	ENST00000592991	SFMBT2	Q5VUG0	894 aa		27.54	■■■□□ 2
LDLRAD4-218	ENST00000592991	ECHDC2	Q86YB7	292 aa		27.54	■■■□□ 2
LDLRAD4-218	ENST00000592991	CCDC112	Q8NEF3	446 aa		27.54	■■■□□ 2
LDLRAD4-218	ENST00000592991	STK33	Q9BYT3	514 aa		27.54	■■■□□ 2
LDLRAD4-218	ENST00000592991	PPEF2	O14830	753 aa		27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	ASS1	P00966	412 aa	Known RBP	27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	PLEK	P08567	350 aa	Predicted RBP	27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	ZBTB6	Q15916	424 aa		27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	TSR1	Q2NL82	804 aa	Known RBP	27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	HACE1	Q8IYU2	909 aa		27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	C17orf53	Q8N3J3	647 aa	Predicted RBP	27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	XYLT2	Q9H1B5	865 aa		27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	GOLGA2P5	Q9HBQ8	144 aa		27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	DERA	Q9Y315	318 aa		27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991	ALPK3	Q96L96	1907 aa		27.53	■■■□□ 2
LDLRAD4-218	ENST00000592991		C9IYK1	514 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	ZNF623	O75123	536 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	KCNE1	P15382	129 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	ITGB8	P26012	769 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	SOX4	Q06945	474 aa	Predicted RBP	27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	MEA1	Q16626	185 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	RAD9B	Q6WBX8	426 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	NT5DC4	Q86YG4	428 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	MIOS	Q9NXC5	875 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	AGAP1	Q9UPQ3	857 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	SCN1A	P35498	2009 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	TRIM43B	A6NCK2	446 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	ZC3H11A	O75152	810 aa	Known RBP eCLIP	27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	GFPT2	O94808	682 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	HNRNPH3	P31942	346 aa	Known RBP	27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	ASIC2	Q16515	512 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	ZNF699	Q32M78	642 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	UBE2Q1	Q7Z7E8	422 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	GSTCD	Q8NEC7	633 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	SEPT8	Q92599	483 aa		27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	TRIM43	Q96BQ3	446 aa	Predicted RBP	27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	TSPYL2	Q9H2G4	693 aa	Predicted RBP	27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	ZNHIT6	Q9NWK9	470 aa	Known RBP	27.52	■■■□□ 2
LDLRAD4-218	ENST00000592991	FOXN3	O00409	490 aa	Predicted RBP	27.51	■■□□□ 1.99
LDLRAD4-218	ENST00000592991	RFX1	P22670	979 aa		27.51	■■□□□ 1.99
LDLRAD4-218	ENST00000592991	ZNF598	Q86UK7	904 aa	Known RBP	27.51	■■□□□ 1.99
LDLRAD4-218	ENST00000592991	BEST2	Q8NFU1	509 aa		27.51	■■□□□ 1.99
LDLRAD4-218	ENST00000592991	IMPG2	Q9BZV3	1241 aa		27.51	■■□□□ 1.99
LDLRAD4-218	ENST00000592991	RSAD1	Q9HA92	442 aa		27.51	■■□□□ 1.99
LDLRAD4-218	ENST00000592991	ARHGAP20	Q9P2F6	1191 aa		27.51	■■□□□ 1.99
LDLRAD4-218	ENST00000592991	CACNG4	Q9UBN1	327 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms