RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 HERPUD2Q9BSE4 406 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 WDR12Q9GZL7 423 aaKnown RBP7.68□□□□□ -1.18
VMP1-215ENST00000592619 GNL3LQ9NVN8 582 aaKnown RBP7.68□□□□□ -1.18
VMP1-215ENST00000592619 CPA4Q9UI42 421 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 PCDHA6Q9UN73 950 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 CORO2BQ9UQ03 480 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 ACTL7AQ9Y615 435 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 KIF27Q86VH2 1401 aa7.68□□□□□ -1.18
VMP1-215ENST00000592619 F5H423 210 aaPredicted RBP7.67□□□□□ -1.18
VMP1-215ENST00000592619 TBX3O15119 743 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 TYRP1P17643 537 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 MCCP23508 829 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 FLT3LGP49771 235 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 RRADP55042 308 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 SPTY2D1Q68D10 685 aaPredicted RBP7.67□□□□□ -1.18
VMP1-215ENST00000592619 MYLK4Q86YV6 388 aaPredicted RBP7.67□□□□□ -1.18
VMP1-215ENST00000592619 CMTM4Q8IZR5 234 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 DCBLD1Q8N8Z6 715 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 GPATCH11Q8N954 259 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 ANKRD53Q8N9V6 530 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 IL17RDQ8NFM7 739 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 FMNL2Q96PY5 1086 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 PNPLA8Q9NP80 782 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.67□□□□□ -1.18
VMP1-215ENST00000592619 ZDHHC8Q9ULC8 765 aa7.67□□□□□ -1.18
VMP1-215ENST00000592619 WNT10BO00744 389 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 IL18RAPO95256 599 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 CENPBP07199 599 aaPredicted RBP7.66□□□□□ -1.18
VMP1-215ENST00000592619 BRAFP15056 766 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 CASRP41180 1078 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 STT3AP46977 705 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 SUMO3P55854 103 aaPredicted RBP7.66□□□□□ -1.18
VMP1-215ENST00000592619 DAG1Q14118 895 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 SSPNQ14714 243 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 TBR1Q16650 682 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 TMEM95Q3KNT9 176 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 FAM209BQ5JX69 171 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 KRT40Q6A162 431 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 MCTP2Q6DN12 878 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 SESTD1Q86VW0 696 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 CARFQ8N187 725 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 MDM1Q8TC05 714 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 POF1BQ8WVV4 589 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 RABGGTAQ92696 567 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 MBD6Q96DN6 1003 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 DPH1Q9BZG8 443 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 C11orf54Q9H0W9 315 aaPredicted RBP7.66□□□□□ -1.18
VMP1-215ENST00000592619 LRCH1Q9Y2L9 728 aa7.66□□□□□ -1.18
VMP1-215ENST00000592619 FHAD1B1AJZ9 1412 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 HMGB1P1B2RPK0 211 aaPredicted RBP7.65□□□□□ -1.18
VMP1-215ENST00000592619 ARHGAP6O43182 974 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 FGF18O76093 207 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 CD1AP06126 327 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 TSHRP16473 764 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 PI3P19957 117 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 PIK3CGP48736 1102 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 GZMKP49863 264 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 APBA1Q02410 837 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 RAPGEF1Q13905 1077 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 PABPC1LQ4VXU2 614 aaKnown RBP7.65□□□□□ -1.18
VMP1-215ENST00000592619 MFSD14BQ5SR56 506 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 GPR155Q7Z3F1 870 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 RNF152Q8N8N0 203 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 ADAMTS17Q8TE56 1095 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 PPM1EQ8WY54 764 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 NMD3Q96D46 503 aaKnown RBP7.65□□□□□ -1.18
VMP1-215ENST00000592619 GPHA2Q96T91 129 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 TRIM54Q9BYV2 358 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 VPS11Q9H270 941 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 CERS4Q9HA82 394 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 GPRC5BQ9NZH0 403 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 CPNE7Q9UBL6 633 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 MED16Q9Y2X0 877 aa7.65□□□□□ -1.18
VMP1-215ENST00000592619 GRIN2AQ12879 1464 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 POM121BA6NF01 834 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 FFAR3O14843 346 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 NCK2O43639 380 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 SASH1O94885 1247 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 MTHFD1P11586 935 aaKnown RBP7.64□□□□□ -1.19
VMP1-215ENST00000592619 PPM1AP35813 382 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 ALDH1A3P47895 512 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 SOX8P57073 446 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 PTH1RQ03431 593 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 MESP2Q0VG99 397 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 MRPL49Q13405 166 aaKnown RBP7.64□□□□□ -1.19
VMP1-215ENST00000592619 ANO1Q5XXA6 986 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 AFMIDQ63HM1 303 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 SEM1Q6ZVN7 128 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 RALYLQ86SE5 291 aaKnown RBP7.64□□□□□ -1.19
VMP1-215ENST00000592619 CELF5Q8N6W0 485 aaKnown RBP7.64□□□□□ -1.19
VMP1-215ENST00000592619 FBXO18Q8NFZ0 1043 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 OR5M3Q8NGP4 307 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 OR14K1Q8NGZ2 314 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 KIAA1191Q96A73 305 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 DACT3Q96B18 629 aaPredicted RBP7.64□□□□□ -1.19
VMP1-215ENST00000592619 LCORQ96JN0 433 aaPredicted RBP7.64□□□□□ -1.19
VMP1-215ENST00000592619 CRB3Q9BUF7 120 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 C1orf43Q9BWL3 253 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 KCNH6Q9H252 994 aa7.64□□□□□ -1.19
VMP1-215ENST00000592619 AFF4Q9UHB7 1163 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms