RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 R3HDM2Q9Y2K5 976 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 MROH7Q68CQ1 1323 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 COL2A1P02458 1487 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 ALDH1B1P30837 517 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 IL9RQ01113 521 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 CCDC89Q8N998 374 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 TMC2Q8TDI7 906 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 PWWP2AQ96N64 755 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 ZNF570Q96NI8 536 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 PITPNM3Q9BZ71 974 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 FOXP3Q9BZS1 431 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 KCNH7Q9NS40 1196 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 RAB20Q9NX57 234 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 SLC5A4Q9NY91 659 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 TRIM33Q9UPN9 1127 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 SLC16A4O15374 487 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 PLA2G6O60733 806 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 MYBL1P10243 752 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 GTF2H1P32780 548 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 WDR4P57081 412 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 ATP11AP98196 1134 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 BZW1Q7L1Q6 419 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 ERICH1Q86X53 443 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 ACER1Q8TDN7 264 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 TAS1R2Q8TE23 839 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 TBK1Q9UHD2 729 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 STK38LQ9Y2H1 464 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 SCN9AQ15858 1988 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 RRM1P23921 792 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 QARSP47897 775 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 PARP6Q2NL67 630 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 NIPA1Q7RTP0 329 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 KIRREL3Q8IZU9 778 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 LARGE2Q8N3Y3 721 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 FBF1Q8TES7 1133 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 DHX38Q92620 1227 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 MFSD14AQ96MC6 490 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 EXOC7Q9UPT5 735 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 STARD13Q9Y3M8 1113 aa15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 ZNF646O15015 1829 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-219ENST00000592604 FAM47DPA6NHR8 397 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 ATP5HO75947 161 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 SLC18A1P54219 525 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 PEX3P56589 373 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 LMNB2Q03252 620 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 CEP128Q6ZU80 1094 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 ENOSF1Q7L5Y1 443 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 CCDC127Q96BQ5 260 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 TRIM11Q96F44 468 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 FBXL18Q96ME1 805 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 RAB3IPQ96QF0 476 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 UBN1Q9NPG3 1134 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 TXLNGQ9NUQ3 528 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 ASMTLO95671 621 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 PAX7P23759 505 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 GCNT1Q02742 428 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 NR1H3Q13133 447 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 TNIP1Q15025 636 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 RGS9BPQ6ZS82 235 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 SEPT14Q6ZU15 432 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 ZNF365Q70YC5 407 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 ANKRD27Q96NW4 1050 aa15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 TRIM6Q9C030 488 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 TDRD3Q9H7E2 651 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 HERC5Q9UII4 1024 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-219ENST00000592604 RASA4BC9J798 803 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 RASA4O43374 803 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 HSD17B4P51659 736 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 IZUMO3Q5VZ72 239 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 MYPNQ86TC9 1320 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 LDHDQ86WU2 507 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 ZNF677Q86XU0 584 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 DENND1AQ8TEH3 1009 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 UTP4Q969X6 686 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 C9orf72Q96LT7 481 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 CSRNP1Q96S65 589 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 ETNK1Q9HBU6 452 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 TBX20Q9UMR3 447 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 MAFGO15525 162 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 PROSCO94903 275 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 RALAP11233 206 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 ATP2A2P16615 1042 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 KLRC2P26717 231 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 CNGA1P29973 690 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 YWHABP31946 246 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 VPS41P49754 854 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 TRABD2AQ86V40 505 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 MAP4K3Q8IVH8 894 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 ZCCHC9Q8N567 271 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 SAAL1Q96ER3 474 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 TMX4Q9H1E5 349 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 LRMDAQ9H2I8 198 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 PSTPIP1O43586 416 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 MAGEA4P43358 317 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 POLGP54098 1239 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 SV2AQ7L0J3 742 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 TDRPQ86YL5 185 aa15.78■□□□□ 0.12
SMARCA4-219ENST00000592604 TMEM161BQ8NDZ6 487 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms