RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CYP26C1Q6V0L0 522 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 CCDC73Q6ZRK6 1079 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 SV2BQ7L1I2 683 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 OTOP3Q7RTS5 596 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 ACSF2Q96CM8 615 aaPredicted RBP15.13■□□□□ 0.01
APOC1-208ENST00000592535 DNAJC19Q96DA6 116 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 ZNF396Q96N95 335 aaPredicted RBP15.13■□□□□ 0.01
APOC1-208ENST00000592535 MSTO1Q9BUK6 570 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 PRKD2Q9BZL6 878 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 SMOC2Q9H3U7 446 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 ST6GALNAC4Q9H4F1 302 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 PLEKHA5Q9HAU0 1116 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 PIDD1Q9HB75 910 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 WDR6Q9NNW5 1121 aaKnown RBP15.13■□□□□ 0.01
APOC1-208ENST00000592535 LIMD1Q9UGP4 676 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 NUB1Q9Y5A7 615 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 CLUHO75153 1309 aa15.13■□□□□ 0.01
APOC1-208ENST00000592535 ZNF318Q5VUA4 2279 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 A0A0B4J269 797 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 LACTBL1A8MY62 500 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 TISP43B9A030 160 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 ANKRD63C9JTQ0 380 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 SPTLC2O15270 562 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 N4BP1O75113 896 aaKnown RBP15.12■□□□□ 0.01
APOC1-208ENST00000592535 ABCD1P33897 745 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 PPP2R3AQ06190 1150 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 RAB33AQ14088 237 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 ENOX2Q16206 610 aaKnown RBP15.12■□□□□ 0.01
APOC1-208ENST00000592535 KYAT1Q16773 422 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 FOXD4L6Q3SYB3 417 aaPredicted RBP15.12■□□□□ 0.01
APOC1-208ENST00000592535 FOXD4L3Q6VB84 417 aaPredicted RBP15.12■□□□□ 0.01
APOC1-208ENST00000592535 ANKS3Q6ZW76 656 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 ZNF720Q7Z2F6 126 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 PDILTQ8N807 584 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 SPRYD3Q8NCJ5 442 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 KIF12Q96FN5 646 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 ASIC4Q96FT7 647 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 IKZF4Q9H2S9 585 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 RPF1Q9H9Y2 349 aaKnown RBP15.12■□□□□ 0.01
APOC1-208ENST00000592535 SORCS3Q9UPU3 1222 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 BACE2Q9Y5Z0 518 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 CDY1Q9Y6F8 540 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 KMT2EQ8IZD2 1858 aa15.12■□□□□ 0.01
APOC1-208ENST00000592535 PPP6R2O75170 966 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 PPP1R37O75864 691 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 YEATS4O95619 227 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 F13A1P00488 732 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 C8AP07357 584 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 ZSCAN22P10073 491 aaPredicted RBP15.11■□□□□ 0.01
APOC1-208ENST00000592535 MCM4P33991 863 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 MTMR3Q13615 1198 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 ZBTB6Q15916 424 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 VARS2Q5ST30 1063 aaKnown RBP15.11■□□□□ 0.01
APOC1-208ENST00000592535 LIN9Q5TKA1 542 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 BMP8AQ7Z5Y6 402 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 PBXIP1Q96AQ6 731 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 MRPL44Q9H9J2 332 aaKnown RBP15.11■□□□□ 0.01
APOC1-208ENST00000592535 TBC1D7Q9P0N9 293 aa15.11■□□□□ 0.01
APOC1-208ENST00000592535 CPSF3Q9UKF6 684 aaKnown RBP15.11■□□□□ 0.01
APOC1-208ENST00000592535 UBQLN1Q9UMX0 589 aaKnown RBP15.11■□□□□ 0.01
APOC1-208ENST00000592535 SYN3O14994 580 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 ADRB2P07550 413 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 IDEP14735 1019 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 GAP43P17677 238 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 LRPAP1P30533 357 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 GBP2P32456 591 aaPredicted RBP15.1■□□□□ 0.01
APOC1-208ENST00000592535 GUCY2FP51841 1108 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 PKP1Q13835 747 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 PPM1LQ5SGD2 360 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 SLC7A14Q8TBB6 771 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 STAMQ92783 540 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 HVCN1Q96D96 273 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 FAM212AQ96EL1 285 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 SUSD3Q96L08 255 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 MFSD14AQ96MC6 490 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 MYADMQ96S97 322 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 STRA6Q9BX79 667 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 SEL1LQ9UBV2 794 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 NOTCH4Q99466 2003 aa15.1■□□□□ 0.01
APOC1-208ENST00000592535 CCL16O15467 120 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 CUTAO60888 179 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 HNRNPA1P09651 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
APOC1-208ENST00000592535 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
APOC1-208ENST00000592535 CYP3A5P20815 502 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 ACOT2P49753 483 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 CASP5P51878 434 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 ROR1Q01973 937 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 KCNA1Q09470 495 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 MRPL58Q14197 206 aaKnown RBP15.09■□□□□ 0.01
APOC1-208ENST00000592535 E2F4Q16254 413 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 AXDND1Q5T1B0 1012 aaPredicted RBP15.09■□□□□ 0.01
APOC1-208ENST00000592535 ADALQ6DHV7 355 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 JADE1Q6IE81 842 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 SLFN12LQ6IEE8 588 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 SLC8B1Q6J4K2 584 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 SHC4Q6S5L8 630 aa15.09■□□□□ 0.01
APOC1-208ENST00000592535 GET4Q7L5D6 327 aaPredicted RBP15.09■□□□□ 0.01
APOC1-208ENST00000592535 GRASPQ7Z6J2 395 aaPredicted RBP15.09■□□□□ 0.01
APOC1-208ENST00000592535 UBALD2Q8IYN6 164 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms