RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 GARTP22102 1010 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 MCM4P33991 863 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 SOX4Q06945 474 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-227ENST00000591849 PSMD2Q13200 908 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 TMEM132DQ14C87 1099 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 NAB2Q15742 525 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 UPP1Q16831 310 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 ZBTB41Q5SVQ8 909 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 DSTYKQ6XUX3 929 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-227ENST00000591849 PALB2Q86YC2 1186 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 NELFCDQ8IXH7 590 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 SAAL1Q96ER3 474 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 FBXL18Q96ME1 805 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 STRA6Q9BX79 667 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 IKZF4Q9H2S9 585 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 ASB7Q9H672 318 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 CHST7Q9NS84 486 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 CHMP5Q9NZZ3 219 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 CLEC1BQ9P126 229 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 TUBGCP4Q9UGJ1 667 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 CPSF3Q9UKF6 684 aaKnown RBP10.94□□□□□ -0.66
BRCA1-227ENST00000591849 HPSEQ9Y251 543 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 STYXL1Q9Y6J8 313 aa10.94□□□□□ -0.66
BRCA1-227ENST00000591849 H7C4K7 107 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 TMEM189-UBE2V1I3L0A0 370 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 I3L4J1 428 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 KIAA0391O15091 583 aaKnown RBP10.93□□□□□ -0.66
BRCA1-227ENST00000591849 EXTL3O43909 919 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 KIF20AO95235 890 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 IL18RAPO95256 599 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 GLP2RO95838 553 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 IL9P15248 144 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 RPL17P18621 184 aaKnown RBP10.93□□□□□ -0.66
BRCA1-227ENST00000591849 CYP3A5P20815 502 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 BRCC3P46736 316 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 PSMD5Q16401 504 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 KMT5BQ4FZB7 885 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 RARS2Q5T160 578 aaKnown RBP10.93□□□□□ -0.66
BRCA1-227ENST00000591849 JADE1Q6IE81 842 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 PRSS55Q6UWB4 352 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-227ENST00000591849 TMEM184AQ6ZMB5 413 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 KRBA2Q6ZNG9 492 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 ANKS3Q6ZW76 656 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 USP37Q86T82 979 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 GPR65Q8IYL9 337 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 GPD1LQ8N335 351 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 VN1R2Q8NFZ6 395 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 ZNF507Q8TCN5 953 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 SLC22A17Q8WUG5 538 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 CACTINQ8WUQ7 758 aaKnown RBP10.93□□□□□ -0.66
BRCA1-227ENST00000591849 MSLNLQ96KJ4 702 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 RIPOR3Q96MK2 946 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 NECAB3Q96P71 396 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-227ENST00000591849 FGFBP2Q9BYJ0 223 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 GOLPH3LQ9H4A5 285 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 RXFP1Q9HBX9 757 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 FNIP2Q9P278 1114 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 HOOK1Q9UJC3 728 aaKnown RBP10.93□□□□□ -0.66
BRCA1-227ENST00000591849 DERAQ9Y315 318 aa10.93□□□□□ -0.66
BRCA1-227ENST00000591849 USP15Q9Y4E8 981 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-227ENST00000591849 UBE4BO95155 1302 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 FAM237AA0A1B0GTK4 181 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 ZNF233A6NK53 670 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 LILRB3O75022 631 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 RPN1P04843 607 aaKnown RBP10.92□□□□□ -0.66
BRCA1-227ENST00000591849 SPATA31D3P0C874 917 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 TKTP29401 623 aaKnown RBP10.92□□□□□ -0.66
BRCA1-227ENST00000591849 ADSSP30520 456 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 CYP2J2P51589 502 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 GUCY2FP51841 1108 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 ARPP19P56211 112 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 TFAMQ00059 246 aaKnown RBP10.92□□□□□ -0.66
BRCA1-227ENST00000591849 POU5F1Q01860 360 aaKnown RBP10.92□□□□□ -0.66
BRCA1-227ENST00000591849 ITIH3Q06033 890 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 SURF1Q15526 300 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 SMAD2Q15796 467 aaKnown RBP10.92□□□□□ -0.66
BRCA1-227ENST00000591849 RTP2Q5QGT7 225 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 ATAT1Q5SQI0 421 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 SPATA31D4Q6ZUB0 917 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 RNF168Q8IYW5 571 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-227ENST00000591849 C12orf76Q8N812 135 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-227ENST00000591849 SMRP1Q8NCR6 262 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 GLIS3Q8NEA6 775 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 APPL2Q8NEU8 664 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 PIK3R5Q8WYR1 880 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 POP1Q99575 1024 aaKnown RBP10.92□□□□□ -0.66
BRCA1-227ENST00000591849 CBWD1Q9BRT8 395 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 PIDD1Q9HB75 910 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 KIAA1586Q9HCI6 787 aa10.92□□□□□ -0.66
BRCA1-227ENST00000591849 RBAKQ9NYW8 714 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-227ENST00000591849 KIAA1671Q9BY89 1806 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 ARHGEF37A1IGU5 675 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 SYN3O14994 580 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 CLIC2O15247 247 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 MEFVO15553 781 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-227ENST00000591849 SMC2O95347 1197 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 ADRB2P07550 413 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 NFICP08651 508 aa10.91□□□□□ -0.66
BRCA1-227ENST00000591849 FGFR3P22607 806 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms