RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ACO2Q99798 780 aaKnown RBP11.43□□□□□ -0.58
VPS4B-207ENST00000591519 KIFC3Q9BVG8 833 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 POLD4Q9HCU8 107 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 SLC2A4RGQ9NR83 387 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 DDX19AQ9NUU7 478 aaKnown RBP11.43□□□□□ -0.58
VPS4B-207ENST00000591519 ARHGAP28Q9P2N2 729 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 FBXL21Q9UKT6 434 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 DNM3Q9UQ16 869 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 GDAQ9Y2T3 454 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 RBM19Q9Y4C8 960 aaKnown RBP11.43□□□□□ -0.58
VPS4B-207ENST00000591519 PCDHB6Q9Y5E3 794 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 BACE2Q9Y5Z0 518 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 DOCK6Q96HP0 2047 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 PHLPP2Q6ZVD8 1323 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 TRIP11Q15643 1979 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 SMIM28A0A1B0GU29 152 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 ADAM12O43184 909 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 LIG1P18858 919 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 FSHRP23945 695 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 IGFBP6P24592 240 aaPredicted RBP11.42□□□□□ -0.58
VPS4B-207ENST00000591519 GRM5P41594 1212 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 NPTX2P47972 431 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 CLCNKBP51801 687 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 HTR4Q13639 388 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 IL17AQ16552 155 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 KRT79Q5XKE5 535 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 PHLDB3Q6NSJ2 640 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 RINT1Q6NUQ1 792 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 SNX29Q8TEQ0 813 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 TMX3Q96JJ7 454 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 MMTAG2Q9BU76 263 aaKnown RBP11.42□□□□□ -0.58
VPS4B-207ENST00000591519 TIPINQ9BVW5 301 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 MTRRQ9UBK8 725 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 KCNG1Q9UIX4 513 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 VWA8A3KMH1 1905 aa11.42□□□□□ -0.58
VPS4B-207ENST00000591519 PTPRZ1P23471 2315 aaPredicted RBP11.42□□□□□ -0.58
VPS4B-207ENST00000591519 CCDC169A6NNP5 214 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 E9PMD0 336 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 TRAPPC3O43617 180 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 C8AP07357 584 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 CFHP08603 1231 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 KCNE1P15382 129 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 PROZP22891 400 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 OR1D2P34982 312 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 PEX3P56589 373 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 MAPK7Q13164 816 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 PPM1LQ5SGD2 360 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 HYIQ5T013 277 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 AXDND1Q5T1B0 1012 aaPredicted RBP11.41□□□□□ -0.58
VPS4B-207ENST00000591519 LIN9Q5TKA1 542 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 RSPO2Q6UXX9 243 aaPredicted RBP11.41□□□□□ -0.58
VPS4B-207ENST00000591519 DTHD1Q6ZMT9 781 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 ANKS3Q6ZW76 656 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 ASCL5Q7RTU5 278 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 TAS1R3Q7RTX0 852 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 GRASPQ7Z6J2 395 aaPredicted RBP11.41□□□□□ -0.58
VPS4B-207ENST00000591519 DTWD2Q8NBA8 298 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 DRC1Q96MC2 740 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 CCDC94Q9BW85 323 aaPredicted RBP11.41□□□□□ -0.58
VPS4B-207ENST00000591519 MRPL4Q9BYD3 311 aaKnown RBP11.41□□□□□ -0.58
VPS4B-207ENST00000591519 CDT1Q9H211 546 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 TOPORSQ9NS56 1045 aaPredicted RBP11.41□□□□□ -0.58
VPS4B-207ENST00000591519 CDH7Q9ULB5 785 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 KCNH3Q9ULD8 1083 aa11.41□□□□□ -0.58
VPS4B-207ENST00000591519 RIF1Q5UIP0 2472 aaKnown RBP11.41□□□□□ -0.58
VPS4B-207ENST00000591519 PRR23AA6NEV1 266 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 NRG2O14511 850 aaPredicted RBP11.4□□□□□ -0.58
VPS4B-207ENST00000591519 ABLIM1O14639 778 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 TBC1D4O60343 1298 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 HIP1RO75146 1068 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 XYLBO75191 536 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 MCF2P10911 925 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 GUCY2CP25092 1073 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 CDC25AP30304 524 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 RPL9P32969 192 aaKnown RBP11.4□□□□□ -0.58
VPS4B-207ENST00000591519 YARSP54577 528 aaKnown RBP11.4□□□□□ -0.58
VPS4B-207ENST00000591519 STARD6P59095 220 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 DMP1Q13316 513 aaPredicted RBP11.4□□□□□ -0.58
VPS4B-207ENST00000591519 RILPL1Q5EBL4 403 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 GLRA4Q5JXX5 417 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 SLC8B1Q6J4K2 584 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 GET4Q7L5D6 327 aaPredicted RBP11.4□□□□□ -0.58
VPS4B-207ENST00000591519 KCNK18Q7Z418 384 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 CEP120Q8N960 986 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 C3orf58Q8NDZ4 430 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 ZNF461Q8TAF7 563 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 GPR152Q8TDT2 470 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 FGF13Q92913 245 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 KCNN1Q92952 543 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 ZMAT2Q96NC0 199 aaKnown RBP11.4□□□□□ -0.58
VPS4B-207ENST00000591519 RPP25Q9BUL9 199 aaKnown RBP11.4□□□□□ -0.58
VPS4B-207ENST00000591519 TARS2Q9BW92 718 aaKnown RBP11.4□□□□□ -0.58
VPS4B-207ENST00000591519 KMT5AQ9NQR1 393 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 AVENQ9NQS1 362 aaPredicted RBP11.4□□□□□ -0.58
VPS4B-207ENST00000591519 SLC38A7Q9NVC3 462 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 DLGAP2Q9P1A6 1054 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 NUMBLQ9Y6R0 609 aa11.4□□□□□ -0.58
VPS4B-207ENST00000591519 NOTCH4Q99466 2003 aa11.4□□□□□ -0.59
VPS4B-207ENST00000591519 PP2D1A8MPX8 630 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms