RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 L1TD1Q5T7N2 865 aaKnown RBP7.02□□□□□ -1.29
VPS4B-205ENST00000591383 FAM117BQ6P1L5 589 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 ZNF365Q70YC5 407 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 SRGAP1Q7Z6B7 1085 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 MYOCDQ8IZQ8 938 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 USP38Q8NB14 1042 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 LINC01599Q8WXQ3 324 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 APBB2Q92870 758 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 HPS3Q969F9 1004 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 DNAJC19Q96DA6 116 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 CPB2Q96IY4 423 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 TRIM6Q9C030 488 aaPredicted RBP7.02□□□□□ -1.29
VPS4B-205ENST00000591383 CCDC113Q9H0I3 377 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 IFT122Q9HBG6 1241 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 C11orf16Q9NQ32 467 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 AGPAT5Q9NUQ2 364 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 PRMT7Q9NVM4 692 aaPredicted RBP7.02□□□□□ -1.29
VPS4B-205ENST00000591383 SEL1LQ9UBV2 794 aa7.02□□□□□ -1.29
VPS4B-205ENST00000591383 KIAA1671Q9BY89 1806 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 LAMA3Q16787 3333 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 COL4A4P53420 1690 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 H0YCG3 227 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 N4BP3O15049 544 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 EFCAB14O75071 495 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 BAIAP3O94812 1187 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 SMC2O95347 1197 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 NPTXRO95502 500 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 FGBP02675 491 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 AMHP03971 560 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 RPN1P04843 607 aaKnown RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 EDN1P05305 212 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 MYBP10242 640 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 MAPTP10636 758 aaKnown RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 ZSCAN20P17040 1043 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 CDK11BP21127 795 aaKnown RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 CES1P23141 567 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 GSTT1P30711 240 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 CASP5P51878 434 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 NCKAP1LP55160 1127 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 NCBP1Q09161 790 aaKnown RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 IKBKEQ14164 716 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 GPNMBQ14956 572 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 CAMK4Q16566 473 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 ZNF568Q3ZCX4 644 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 TMEM240Q5SV17 173 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 C6orf118Q5T5N4 469 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 TTC39BQ5VTQ0 682 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 KIAA0319Q5VV43 1072 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 KANK3Q6NY19 840 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 NOTUMQ6P988 496 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 CLEC17AQ6ZS10 378 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 TRIM67Q6ZTA4 783 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 STXBP4Q6ZWJ1 553 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 UNC13DQ70J99 1090 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 HAUS6Q7Z4H7 955 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 TMCO2Q7Z6W1 182 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 CDR2LQ86X02 465 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 TMEM161BQ8NDZ6 487 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 GLIS3Q8NEA6 775 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 NOC3LQ8WTT2 800 aaKnown RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 ERCC4Q92889 916 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 SMARCE1Q969G3 411 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 ADAM2Q99965 735 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 GDF15Q99988 308 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 C7orf25Q9BPX7 421 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 RSRP1Q9BUV0 290 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 APOL6Q9BWW8 343 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 FTHL17Q9BXU8 183 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 MRPL4Q9BYD3 311 aaKnown RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 NFKBIZQ9BYH8 718 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 FGFBP2Q9BYJ0 223 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 ZCCHC2Q9C0B9 1178 aaKnown RBP7.01□□□□□ -1.29
VPS4B-205ENST00000591383 NUP62CLQ9H1M0 184 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 TMX1Q9H3N1 280 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 PIF1Q9H611 641 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 C17orf75Q9HAS0 396 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 BRD7Q9NPI1 651 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 LMBRD1Q9NUN5 540 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 ARHGAP28Q9P2N2 729 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 SLC4A7Q9Y6M7 1214 aa7.01□□□□□ -1.29
VPS4B-205ENST00000591383 CHD9Q3L8U1 2897 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 ZMYM2Q9UBW7 1377 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 ABHD14A-ACY1A0A1B0GW23 586 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 A0A1W2PP55 124 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 FRMD3A2A2Y4 597 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 K7ERI5 159 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 STK10O94804 968 aaKnown RBP7□□□□□ -1.29
VPS4B-205ENST00000591383 MBD3O95983 291 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 MYL1P05976 194 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 ATP2A2P16615 1042 aaKnown RBP7□□□□□ -1.29
VPS4B-205ENST00000591383 ARF4P18085 180 aaPredicted RBP7□□□□□ -1.29
VPS4B-205ENST00000591383 MCM4P33991 863 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 LIG4P49917 911 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 PRR20EP86478 221 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 PRR20CP86479 221 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 PRR20DP86480 221 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 PRR20BP86481 221 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 PRR20AP86496 221 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 SNW1Q13573 536 aaKnown RBP7□□□□□ -1.29
VPS4B-205ENST00000591383 SHHQ15465 462 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms