RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 TPRNQ4KMQ1 711 aa24.33■■□□□ 1.49
MBD3-208ENST00000590830 RARS2Q5T160 578 aaKnown RBP24.33■■□□□ 1.49
MBD3-208ENST00000590830 LILRA6Q6PI73 481 aa24.33■■□□□ 1.49
MBD3-208ENST00000590830 PALB2Q86YC2 1186 aa24.33■■□□□ 1.49
MBD3-208ENST00000590830 PIK3R5Q8WYR1 880 aa24.33■■□□□ 1.49
MBD3-208ENST00000590830 CLSTN3Q9BQT9 956 aa24.33■■□□□ 1.49
MBD3-208ENST00000590830 MAGEF1Q9HAY2 307 aa24.33■■□□□ 1.49
MBD3-208ENST00000590830 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.33■■□□□ 1.49
MBD3-208ENST00000590830 DZANK1Q9NVP4 752 aa24.33■■□□□ 1.49
MBD3-208ENST00000590830 ATP6V1DQ9Y5K8 247 aa24.33■■□□□ 1.49
MBD3-208ENST00000590830 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.32■■□□□ 1.48
MBD3-208ENST00000590830 ADAM12O43184 909 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 ADH1AP07327 375 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 SLFN14P0C7P3 912 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 SPATA31D3P0C874 917 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 AFMP43652 599 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 GUCY2FP51841 1108 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 EHHADHQ08426 723 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 ELAVL2Q12926 359 aaKnown RBP24.32■■□□□ 1.48
MBD3-208ENST00000590830 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.32■■□□□ 1.48
MBD3-208ENST00000590830 SPATA31D4Q6ZUB0 917 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 GLYCTKQ8IVS8 523 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 KIF12Q96FN5 646 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 GDPD2Q9HCC8 539 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 EXOC7Q9UPT5 735 aa24.32■■□□□ 1.48
MBD3-208ENST00000590830 FAM237AA0A1B0GTK4 181 aa24.31■■□□□ 1.48
MBD3-208ENST00000590830 TGM5O43548 720 aa24.31■■□□□ 1.48
MBD3-208ENST00000590830 TKTP29401 623 aaKnown RBP24.31■■□□□ 1.48
MBD3-208ENST00000590830 SSTR3P32745 418 aaPredicted RBP24.31■■□□□ 1.48
MBD3-208ENST00000590830 PPP2R3AQ06190 1150 aa24.31■■□□□ 1.48
MBD3-208ENST00000590830 ALCAMQ13740 583 aa24.31■■□□□ 1.48
MBD3-208ENST00000590830 CBX2Q14781 532 aaPredicted RBP24.31■■□□□ 1.48
MBD3-208ENST00000590830 RSPO2Q6UXX9 243 aaPredicted RBP24.31■■□□□ 1.48
MBD3-208ENST00000590830 TMC5Q6UXY8 1006 aa24.31■■□□□ 1.48
MBD3-208ENST00000590830 EPM2AIP1Q7L775 607 aaPredicted RBP24.31■■□□□ 1.48
MBD3-208ENST00000590830 POMGNT1Q8WZA1 660 aa24.31■■□□□ 1.48
MBD3-208ENST00000590830 FAM212AQ96EL1 285 aa24.31■■□□□ 1.48
MBD3-208ENST00000590830 PAGE5Q96GU1 130 aa24.31■■□□□ 1.48
MBD3-208ENST00000590830 PHF7Q9BWX1 381 aaPredicted RBP24.31■■□□□ 1.48
MBD3-208ENST00000590830 SCAND2PQ9GZW5 306 aaPredicted RBP24.31■■□□□ 1.48
MBD3-208ENST00000590830 CITO14578 2027 aa24.3■■□□□ 1.48
MBD3-208ENST00000590830 LRPAP1P30533 357 aa24.3■■□□□ 1.48
MBD3-208ENST00000590830 ITIH3Q06033 890 aa24.3■■□□□ 1.48
MBD3-208ENST00000590830 POSTNQ15063 836 aa24.3■■□□□ 1.48
MBD3-208ENST00000590830 PSMD5Q16401 504 aa24.3■■□□□ 1.48
MBD3-208ENST00000590830 JADE1Q6IE81 842 aa24.3■■□□□ 1.48
MBD3-208ENST00000590830 UNC13DQ70J99 1090 aa24.3■■□□□ 1.48
MBD3-208ENST00000590830 MAN1C1Q9NR34 630 aa24.3■■□□□ 1.48
MBD3-208ENST00000590830 LOC730098B7Z3J9 87 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 GLUD1P00367 558 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 CYP3A5P20815 502 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 NDUFA8P51970 172 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 SPATA1Q5VX52 437 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 SYCP3Q8IZU3 236 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 ZNF507Q8TCN5 953 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 PYM1Q9BRP8 204 aaKnown RBP24.29■■□□□ 1.48
MBD3-208ENST00000590830 CBWD1Q9BRT8 395 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 POMKQ9H5K3 350 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 EPHX3Q9H6B9 360 aa24.29■■□□□ 1.48
MBD3-208ENST00000590830 UBQLN1Q9UMX0 589 aaKnown RBP24.29■■□□□ 1.48
MBD3-208ENST00000590830 PPEF2O14830 753 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 TRAPPC3O43617 180 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 KLRC4O43908 158 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 C1RP00736 705 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 NFICP08651 508 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 GARTP22102 1010 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 WNT7BP56706 349 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 NUCB2P80303 420 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 CREMQ03060 361 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 FAM26FQ5R3K3 315 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 CES5AQ6NT32 575 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 CD302Q8IX05 232 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 CEP57L1Q8IYX8 460 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 SAAL1Q96ER3 474 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 RPGRIP1Q96KN7 1286 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 TSPAN18Q96SJ8 248 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 FAM213AQ9BRX8 229 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 GOLPH3LQ9H4A5 285 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 TMEM206Q9H813 350 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 SFXN1Q9H9B4 322 aa24.28■■□□□ 1.48
MBD3-208ENST00000590830 PVALEFA0A1B0GWK0 134 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 A0A1W2PQ27 194 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 A0A1W2PQ64 194 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 A0A1W2PQD8 194 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 RFPL2O75678 378 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 POU5F1Q01860 360 aaKnown RBP24.27■■□□□ 1.48
MBD3-208ENST00000590830 GPR149Q86SP6 731 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 SUSD3Q96L08 255 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 POP1Q99575 1024 aaKnown RBP24.27■■□□□ 1.48
MBD3-208ENST00000590830 PCIF1Q9H4Z3 704 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 ASB7Q9H672 318 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 MTRRQ9UBK8 725 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 NUB1Q9Y5A7 615 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 VWA8A3KMH1 1905 aa24.27■■□□□ 1.48
MBD3-208ENST00000590830 GOLGA8IPA6NC78 632 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 GOLGA8JA6NMD2 632 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 TBC1D4O60343 1298 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 OR1D2P34982 312 aa24.26■■□□□ 1.47
MBD3-208ENST00000590830 MRPL58Q14197 206 aaKnown RBP24.26■■□□□ 1.47
MBD3-208ENST00000590830 ATAT1Q5SQI0 421 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms