RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 PARP2Q9UGN5 583 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 ASS1P00966 412 aaKnown RBP18.78■□□□□ 0.6
CXXC1-212ENST00000589940 SOX5P35711 763 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 NOP14P78316 857 aaKnown RBP18.78■□□□□ 0.6
CXXC1-212ENST00000589940 ARID5AQ03989 594 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 TOGARAM2Q6ZUX3 1019 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 GPIHBP1Q8IV16 184 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 HACE1Q8IYU2 909 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 C17orf53Q8N3J3 647 aaPredicted RBP18.78■□□□□ 0.6
CXXC1-212ENST00000589940 KAT5Q92993 513 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 KREMEN1Q96MU8 473 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 TOX2Q96NM4 488 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 RALGAPA2Q2PPJ7 1873 aa18.78■□□□□ 0.6
CXXC1-212ENST00000589940 MGEA5O60502 916 aa18.77■□□□□ 0.6
CXXC1-212ENST00000589940 SGSM1Q2NKQ1 1148 aa18.77■□□□□ 0.6
CXXC1-212ENST00000589940 XKR4Q5GH76 650 aa18.77■□□□□ 0.6
CXXC1-212ENST00000589940 SCARA3Q6AZY7 606 aa18.77■□□□□ 0.6
CXXC1-212ENST00000589940 IRF2BP2Q7Z5L9 587 aa18.77■□□□□ 0.6
CXXC1-212ENST00000589940 CCDC170Q8IYT3 715 aa18.77■□□□□ 0.6
CXXC1-212ENST00000589940 ELMO3Q96BJ8 720 aa18.77■□□□□ 0.6
CXXC1-212ENST00000589940 ZMAT2Q96NC0 199 aaKnown RBP18.77■□□□□ 0.6
CXXC1-212ENST00000589940 CXCL16Q9H2A7 254 aa18.77■□□□□ 0.6
CXXC1-212ENST00000589940 APOBEC3GQ9HC16 384 aaKnown RBP18.77■□□□□ 0.6
CXXC1-212ENST00000589940 DCDC2CA8MYV0 355 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 PLEKP08567 350 aaPredicted RBP18.77■□□□□ 0.59
CXXC1-212ENST00000589940 PNMA6AP0CW24 399 aaPredicted RBP18.77■□□□□ 0.59
CXXC1-212ENST00000589940 FERP16591 822 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 RAB27AP51159 221 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 MYL6P60660 151 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 KLHL30Q0D2K2 578 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 SPOPLQ6IQ16 392 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 CCDC42Q96M95 316 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 TSPAN18Q96SJ8 248 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 IFIH1Q9BYX4 1025 aaKnown RBP18.77■□□□□ 0.59
CXXC1-212ENST00000589940 KCND1Q9NSA2 647 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 SIX4Q9UIU6 781 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 ITGA11Q9UKX5 1188 aa18.77■□□□□ 0.59
CXXC1-212ENST00000589940 BZW2Q9Y6E2 419 aaKnown RBP18.77■□□□□ 0.59
CXXC1-212ENST00000589940 SSU72P8A0A1W2PR75 194 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 FOXN3O00409 490 aaPredicted RBP18.76■□□□□ 0.59
CXXC1-212ENST00000589940 GFPT2O94808 682 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 PRKCIP41743 596 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
CXXC1-212ENST00000589940 TRIM60Q495X7 471 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 TDRD12Q587J7 1177 aaKnown RBP18.76■□□□□ 0.59
CXXC1-212ENST00000589940 CXorf38Q8TB03 319 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 SHC3Q92529 594 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 ADAM2Q99965 735 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 DPP3Q9NY33 737 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 EPN1Q9Y6I3 576 aaPredicted RBP18.76■□□□□ 0.59
CXXC1-212ENST00000589940 ZNF500O60304 480 aaPredicted RBP18.76■□□□□ 0.59
CXXC1-212ENST00000589940 EVI5O60447 810 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 ZNF623O75123 536 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 CLSTN1O94985 981 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 NDUFA10O95299 355 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 ITGB3P05106 788 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 KRT19P08727 400 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 CCDC172P0C7W6 258 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 KCNE1P15382 129 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 CAPN2P17655 700 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 CYLC1P35663 651 aaPredicted RBP18.76■□□□□ 0.59
CXXC1-212ENST00000589940 EIF4A3P38919 411 aaKnown RBP18.76■□□□□ 0.59
CXXC1-212ENST00000589940 TLE2Q04725 743 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 ZBTB6Q15916 424 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 MRPL10Q7Z7H8 261 aaKnown RBP18.76■□□□□ 0.59
CXXC1-212ENST00000589940 CCAR2Q8N163 923 aaKnown RBP18.76■□□□□ 0.59
CXXC1-212ENST00000589940 TAF4BQ92750 862 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 TMEM106CQ9BVX2 250 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 XYLT2Q9H1B5 865 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 KLK14Q9P0G3 267 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 NUB1Q9Y5A7 615 aa18.76■□□□□ 0.59
CXXC1-212ENST00000589940 KIAA0100Q14667 2235 aaKnown RBP18.75■□□□□ 0.59
CXXC1-212ENST00000589940 A0A0U1RQF3 1178 aa18.75■□□□□ 0.59
CXXC1-212ENST00000589940 ITGA4P13612 1032 aa18.75■□□□□ 0.59
CXXC1-212ENST00000589940 TBXAS1P24557 533 aaPredicted RBP18.75■□□□□ 0.59
CXXC1-212ENST00000589940 FAAP100Q0VG06 881 aa18.75■□□□□ 0.59
CXXC1-212ENST00000589940 CUL2Q13617 745 aa18.75■□□□□ 0.59
CXXC1-212ENST00000589940 ZNF699Q32M78 642 aa18.75■□□□□ 0.59
CXXC1-212ENST00000589940 JAKMIP2Q96AA8 810 aa18.75■□□□□ 0.59
CXXC1-212ENST00000589940 DESI2Q9BSY9 194 aa18.75■□□□□ 0.59
CXXC1-212ENST00000589940 DEF6Q9H4E7 631 aa18.75■□□□□ 0.59
CXXC1-212ENST00000589940 SMIM28A0A1B0GU29 152 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 GLRA4Q5JXX5 417 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 FAM71AQ8IYT1 594 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 BEST2Q8NFU1 509 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 ARID3AQ99856 593 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 HAUS4Q9H6D7 363 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 C11orf49Q9H6J7 331 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 UBQLN1Q9UMX0 589 aaKnown RBP18.74■□□□□ 0.59
CXXC1-212ENST00000589940 PPP2R2CQ9Y2T4 447 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 ADGRG1Q9Y653 693 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 CCDC175P0C221 793 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 SKIP12755 728 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 ATICP31939 592 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 GUCY2FP51841 1108 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 PTK2Q05397 1052 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 PAWRQ96IZ0 340 aaKnown RBP18.74■□□□□ 0.59
CXXC1-212ENST00000589940 NIF3L1Q9GZT8 377 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 HIPK3Q9H422 1215 aa18.74■□□□□ 0.59
CXXC1-212ENST00000589940 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms