RNA–Protein interactions for RNA: ENST00000589006.1

SAFB-206, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 459 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-206ENST00000589006 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.43■■□□□ 1.02
SAFB-206ENST00000589006 MAPK13O15264 365 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 NR2F2P24468 414 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 PPM1AP35813 382 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 PLCB3Q01970 1234 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 SPAG1Q07617 926 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 ADAM9Q13443 819 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 JADE1Q6IE81 842 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 NT5DC4Q86YG4 428 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 RDH13Q8NBN7 331 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 NOC3LQ8WTT2 800 aaKnown RBP21.42■■□□□ 1.02
SAFB-206ENST00000589006 C18orf25Q96B23 403 aaPredicted RBP21.42■■□□□ 1.02
SAFB-206ENST00000589006 KIF12Q96FN5 646 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 UROC1Q96N76 676 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 TSG101Q99816 390 aa21.42■■□□□ 1.02
SAFB-206ENST00000589006 UBQLN1Q9UMX0 589 aaKnown RBP21.42■■□□□ 1.02
SAFB-206ENST00000589006 TRIM49BA6NDI0 452 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 PRR33A8MZF0 331 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 NT5C1B-RDH14C9J2C7 533 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 FGF18O76093 207 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 ITGB1P05556 798 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 NFICP08651 508 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 OR1G1P47890 313 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 CASP4P49662 377 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 MRE11P49959 708 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 CYP24A1Q07973 514 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 SURF1Q15526 300 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 SKOR2Q2VWA4 1001 aaPredicted RBP21.41■■□□□ 1.02
SAFB-206ENST00000589006 SPATA1Q5VX52 437 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 TTI2Q6NXR4 508 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 CAVIN1Q6NZI2 390 aaKnown RBP21.41■■□□□ 1.02
SAFB-206ENST00000589006 NELFBQ8WX92 580 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 SYAP1Q96A49 352 aaPredicted RBP21.41■■□□□ 1.02
SAFB-206ENST00000589006 IGSF21Q96ID5 467 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 PAAF1Q9BRP4 392 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 PDE11AQ9HCR9 933 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 MARCH5Q9NX47 278 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 CACNG4Q9UBN1 327 aa21.41■■□□□ 1.02
SAFB-206ENST00000589006 CASTOR2A6NHX0 329 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 XPOTO43592 962 aaKnown RBP21.4■■□□□ 1.02
SAFB-206ENST00000589006 LRPAP1P30533 357 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 RPL9P32969 192 aaKnown RBP21.4■■□□□ 1.02
SAFB-206ENST00000589006 MCCD1P59942 119 aaPredicted RBP21.4■■□□□ 1.02
SAFB-206ENST00000589006 PAK1Q13153 545 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 GPM6BQ13491 265 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 TMEM132DQ14C87 1099 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 PSMD6Q15008 389 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 UPP1Q16831 310 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 DPCR1Q3MIW9 517 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 KLHL10Q6JEL2 608 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 TMEM173Q86WV6 379 aaPredicted RBP21.4■■□□□ 1.02
SAFB-206ENST00000589006 EFCAB13Q8IY85 973 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 SPPL3Q8TCT6 385 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 GDPD5Q8WTR4 605 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 BCL7CQ8WUZ0 217 aaPredicted RBP21.4■■□□□ 1.02
SAFB-206ENST00000589006 DDX27Q96GQ7 796 aaKnown RBP21.4■■□□□ 1.02
SAFB-206ENST00000589006 DUSP9Q99956 384 aaKnown RBP21.4■■□□□ 1.02
SAFB-206ENST00000589006 COLEC11Q9BWP8 271 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 GZF1Q9H116 711 aaPredicted RBP21.4■■□□□ 1.02
SAFB-206ENST00000589006 GOLGA2P5Q9HBQ8 144 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 TUBGCP4Q9UGJ1 667 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 CTNND2Q9UQB3 1225 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 LZTS1Q9Y250 596 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 FRMD4BQ9Y2L6 1034 aa21.4■■□□□ 1.02
SAFB-206ENST00000589006 BICDL2A1A5D9 508 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 TMEM189-UBE2V1I3L0A0 370 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 CETN3O15182 167 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 AKAP3O75969 853 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 EFEMP2O95967 443 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 CLCNKBP51801 687 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 FKBP3Q00688 224 aaKnown RBP21.39■■□□□ 1.01
SAFB-206ENST00000589006 UBE3AQ05086 875 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 NFKBIBQ15653 356 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 MKNK1Q9BUB5 465 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 PRG3Q9Y2Y8 225 aaPredicted RBP21.39■■□□□ 1.01
SAFB-206ENST00000589006 ATG2AQ2TAZ0 1938 aa21.39■■□□□ 1.01
SAFB-206ENST00000589006 F8W810 466 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 GRM6O15303 877 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 PSMC2P35998 433 aaKnown RBP21.38■■□□□ 1.01
SAFB-206ENST00000589006 CLDN10P78369 228 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 CT47A1Q5JQC4 288 aaPredicted RBP21.38■■□□□ 1.01
SAFB-206ENST00000589006 CEP135Q66GS9 1140 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 DCLRE1AQ6PJP8 1040 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 CD300LGQ6UXG3 332 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 DDX53Q86TM3 631 aaKnown RBP21.38■■□□□ 1.01
SAFB-206ENST00000589006 WDR49Q8IV35 697 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 BEST2Q8NFU1 509 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 PARD3BQ8TEW8 1205 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 RABGGTAQ92696 567 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 MED15Q96RN5 788 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 LMAN2LQ9H0V9 348 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 ALG13Q9NP73 1137 aaKnown RBP21.38■■□□□ 1.01
SAFB-206ENST00000589006 RWDD2AQ9UIY3 292 aa21.38■■□□□ 1.01
SAFB-206ENST00000589006 KIF4AO95239 1232 aa21.37■■□□□ 1.01
SAFB-206ENST00000589006 KRT17Q04695 432 aa21.37■■□□□ 1.01
SAFB-206ENST00000589006 ENPEPQ07075 957 aa21.37■■□□□ 1.01
SAFB-206ENST00000589006 CAMK1Q14012 370 aa21.37■■□□□ 1.01
SAFB-206ENST00000589006 SASS6Q6UVJ0 657 aa21.37■■□□□ 1.01
SAFB-206ENST00000589006 RNF168Q8IYW5 571 aaPredicted RBP21.37■■□□□ 1.01
SAFB-206ENST00000589006 TMEM130Q8N3G9 435 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms