RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TATDN2Q93075 761 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 TRIM43Q96BQ3 446 aaPredicted RBP12.2□□□□□ -0.46
VMP1-207ENST00000588131 IQCDQ96DY2 449 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 ZFP42Q96MM3 310 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 NAA15Q9BXJ9 866 aaKnown RBP12.2□□□□□ -0.46
VMP1-207ENST00000588131 RGS18Q9NS28 235 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 ABHD10Q9NUJ1 306 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 APEX2Q9UBZ4 518 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 TUBGCP4Q9UGJ1 667 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 SIX4Q9UIU6 781 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 DNAJC12Q9UKB3 198 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 LUC7L2Q9Y383 392 aaKnown RBP12.2□□□□□ -0.46
VMP1-207ENST00000588131 C2CD2Q9Y426 696 aa12.2□□□□□ -0.46
VMP1-207ENST00000588131 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 SMIM28A0A1B0GU29 152 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 LRRC53A6NM62 1247 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 C9IYK1 514 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 PTGESO14684 152 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 ITGB3P05106 788 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 MLH1P40692 756 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 MYL6P60660 151 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 CCZ1BP86790 482 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 CCZ1P86791 482 aaPredicted RBP12.19□□□□□ -0.46
VMP1-207ENST00000588131 ZBTB6Q15916 424 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 CACNA2D4Q7Z3S7 1137 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 DEFB128Q7Z7B8 93 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 ZNF598Q86UK7 904 aaKnown RBP12.19□□□□□ -0.46
VMP1-207ENST00000588131 ECHDC2Q86YB7 292 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 NT5DC4Q86YG4 428 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 TMEM139Q8IV31 216 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 HACE1Q8IYU2 909 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 RNF169Q8NCN4 708 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 HELQQ8TDG4 1101 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 SEPT8Q92599 483 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 KAT5Q92993 513 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 C18orf25Q96B23 403 aaPredicted RBP12.19□□□□□ -0.46
VMP1-207ENST00000588131 VWCEQ96DN2 955 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 NT5C1BQ96P26 610 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 DNAJC7Q99615 494 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 FTHL17Q9BXU8 183 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 EDEM3Q9BZQ6 932 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
VMP1-207ENST00000588131 APOBEC3GQ9HC16 384 aaKnown RBP12.19□□□□□ -0.46
VMP1-207ENST00000588131 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
VMP1-207ENST00000588131 FBXL5Q9UKA1 691 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 DERAQ9Y315 318 aa12.19□□□□□ -0.46
VMP1-207ENST00000588131 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.19□□□□□ -0.46
VMP1-207ENST00000588131 ENPP3O14638 875 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 KIAA0355O15063 1070 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 ZC3H11AO75152 810 aaKnown RBP eCLIP12.18□□□□□ -0.46
VMP1-207ENST00000588131 KRT19P08727 400 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 PNMA6AP0CW24 399 aaPredicted RBP12.18□□□□□ -0.46
VMP1-207ENST00000588131 KCNE1P15382 129 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 AFF1P51825 1210 aaKnown RBP12.18□□□□□ -0.46
VMP1-207ENST00000588131 JAM2P57087 298 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 FAM189BP81408 668 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 SOX4Q06945 474 aaPredicted RBP12.18□□□□□ -0.46
VMP1-207ENST00000588131 RAPGEF1Q13905 1077 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 WDR59Q6PJI9 974 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 SLC24A5Q71RS6 500 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 GSTCDQ8NEC7 633 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 OR8K1Q8NGG5 319 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 TRIM44Q96DX7 344 aaPredicted RBP12.18□□□□□ -0.46
VMP1-207ENST00000588131 KREMEN1Q96MU8 473 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 PANX2Q96RD6 677 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 GAD1Q99259 594 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 GPR88Q9GZN0 384 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 XYLT2Q9H1B5 865 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 UBE2TQ9NPD8 197 aaPredicted RBP12.18□□□□□ -0.46
VMP1-207ENST00000588131 C1orf112Q9NSG2 853 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 MIOSQ9NXC5 875 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 DPP3Q9NY33 737 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 NUB1Q9Y5A7 615 aa12.18□□□□□ -0.46
VMP1-207ENST00000588131 ARL5CA6NH57 179 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 PPEF2O14830 753 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 PARNO95453 639 aaKnown RBP12.17□□□□□ -0.46
VMP1-207ENST00000588131 ASS1P00966 412 aaKnown RBP12.17□□□□□ -0.46
VMP1-207ENST00000588131 TIMP1P01033 207 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 SKIP12755 728 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 FECHP22830 423 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 POLR2BP30876 1174 aaKnown RBP12.17□□□□□ -0.46
VMP1-207ENST00000588131 NOP14P78316 857 aaKnown RBP12.17□□□□□ -0.46
VMP1-207ENST00000588131 TRPC3Q13507 836 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 DRAP1Q14919 205 aaPredicted RBP12.17□□□□□ -0.46
VMP1-207ENST00000588131 ARHGAP44Q17R89 818 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 HS1BP3Q53T59 392 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 WDR44Q5JSH3 913 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 PPM1KQ8N3J5 372 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 ZNF397Q8NF99 534 aaPredicted RBP12.17□□□□□ -0.46
VMP1-207ENST00000588131 BEST2Q8NFU1 509 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 APBB2Q92870 758 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 PGBD4Q96DM1 585 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 PPP1R10Q96QC0 940 aaKnown RBP12.17□□□□□ -0.46
VMP1-207ENST00000588131 STK33Q9BYT3 514 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 RSAD1Q9HA92 442 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 GOLGA2P5Q9HBQ8 144 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 ITGA11Q9UKX5 1188 aa12.17□□□□□ -0.46
VMP1-207ENST00000588131 UBQLN1Q9UMX0 589 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms