RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ARMCX5Q6P1M9 558 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.98□□□□□ -0.65
TPM4-207ENST00000588032 HS2ST1Q7LGA3 356 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 SMRP1Q8NCR6 262 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 BEST2Q8NFU1 509 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 SLC22A17Q8WUG5 538 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 PIK3R5Q8WYR1 880 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 FAM212AQ96EL1 285 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 FGFBP2Q9BYJ0 223 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 EXOC1Q9NV70 894 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 DZANK1Q9NVP4 752 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 CACNG4Q9UBN1 327 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 C2CD2Q9Y426 696 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 NUB1Q9Y5A7 615 aa10.98□□□□□ -0.65
TPM4-207ENST00000588032 TISP43B9A030 160 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 C2CD2LO14523 706 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 SYN3O14994 580 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 TEX28O15482 410 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 MBTPS2O43462 519 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 RPN1P04843 607 aaKnown RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 FGFR3P22607 806 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 CASP1P29466 404 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 ITIH3Q06033 890 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 TMEM132DQ14C87 1099 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 SURF1Q15526 300 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 SMAD2Q15796 467 aaKnown RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 KNOP1Q1ED39 458 aaKnown RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 KMT5BQ4FZB7 885 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 CRELD2Q6UXH1 353 aaPredicted RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 ANKS3Q6ZW76 656 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 CEP57Q86XR8 500 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 GRAMD1CQ8IYS0 662 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 FMR1NBQ8N0W7 255 aaPredicted RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 GPD1LQ8N335 351 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 VN1R2Q8NFZ6 395 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 GOLGA5Q8TBA6 731 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 ADAMTS19Q8TE59 1207 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 HASPINQ8TF76 798 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 HDAC7Q8WUI4 952 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 CACTINQ8WUQ7 758 aaKnown RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 SCFD1Q8WVM8 642 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 RIN2Q8WYP3 895 aaPredicted RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 HPS3Q969F9 1004 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 C18orf25Q96B23 403 aaPredicted RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 TIGD1Q96MW7 591 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 FAM213AQ9BRX8 229 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 GOLPH3LQ9H4A5 285 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 GOLGA2P5Q9HBQ8 144 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 SLC39A2Q9NP94 309 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 PRKAG3Q9UGI9 489 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 HOOK1Q9UJC3 728 aaKnown RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 BARX2Q9UMQ3 279 aaPredicted RBP10.97□□□□□ -0.65
TPM4-207ENST00000588032 CHD7Q9P2D1 2997 aa10.97□□□□□ -0.65
TPM4-207ENST00000588032 ARHGEF37A1IGU5 675 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 ZNF233A6NK53 670 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 RHOBTB3O94955 611 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 HOXD13P35453 343 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 CLCN4P51793 760 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 SPAG1Q07617 926 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 DPYDQ12882 1025 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 KCNB1Q14721 858 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 RTP2Q5QGT7 225 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 JADE1Q6IE81 842 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 CES5AQ6NT32 575 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 LLGL2Q6P1M3 1020 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 CD300LGQ6UXG3 332 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 BRSK2Q8IWQ3 736 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 C12orf56Q8IXR9 622 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 ELOA2Q8IYF1 753 aaPredicted RBP10.96□□□□□ -0.65
TPM4-207ENST00000588032 GLIS3Q8NEA6 775 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 LNX1Q8TBB1 728 aaPredicted RBP10.96□□□□□ -0.65
TPM4-207ENST00000588032 TMEM174Q8WUU8 243 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 SUSD3Q96L08 255 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 FBXL18Q96ME1 805 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 UHRF1Q96T88 793 aaPredicted RBP10.96□□□□□ -0.65
TPM4-207ENST00000588032 CBWD1Q9BRT8 395 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 COL25A1Q9BXS0 654 aaPredicted RBP10.96□□□□□ -0.65
TPM4-207ENST00000588032 OXCT2Q9BYC2 517 aaPredicted RBP10.96□□□□□ -0.65
TPM4-207ENST00000588032 GTPBP4Q9BZE4 634 aaKnown RBP10.96□□□□□ -0.65
TPM4-207ENST00000588032 S1PR5Q9H228 398 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 IKZF4Q9H2S9 585 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 PLEKHA4Q9H4M7 779 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 TUBGCP4Q9UGJ1 667 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 BACE2Q9Y5Z0 518 aa10.96□□□□□ -0.65
TPM4-207ENST00000588032 CDH23Q9H251 3354 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 H7C4K7 107 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 DLL1O00548 723 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 TGFB1I1O43294 461 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 GABBR2O75899 941 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 GLUD1P00367 558 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 NFICP08651 508 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 MCM4P33991 863 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 RBM10P98175 930 aaKnown RBP10.95□□□□□ -0.66
TPM4-207ENST00000588032 STK4Q13043 487 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 SNW1Q13573 536 aaKnown RBP10.95□□□□□ -0.66
TPM4-207ENST00000588032 PSMD5Q16401 504 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 SYCE2Q6PIF2 218 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 CYP26C1Q6V0L0 522 aa10.95□□□□□ -0.66
TPM4-207ENST00000588032 RTL10Q7L3V2 364 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms