RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 KBTBD4Q9NVX7 518 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 RGL1Q9NZL6 768 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 COL4A3BPQ9Y5P4 624 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 ARID2Q68CP9 1835 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 ZNF292O60281 2723 aa8.58□□□□□ -1.04
VMP1-204ENST00000587259 GPR179Q6PRD1 2367 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 ARL5CA6NH57 179 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 BIN1O00499 593 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 B4GALT5O43286 388 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 HRO43593 1189 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 SOD2P04179 222 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 RPN1P04843 607 aaKnown RBP8.57□□□□□ -1.04
VMP1-204ENST00000587259 ALDH2P05091 517 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 URODP06132 367 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 PLCG1P19174 1290 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 RFX1P22670 979 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 AKAP5P24588 427 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 ZNF75DP51815 510 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 GSDMDP57764 484 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 PSMC5P62195 406 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 CYP4A11Q02928 519 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 SPAG1Q07617 926 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 GIT2Q14161 759 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 CTTNQ14247 550 aaKnown RBP8.57□□□□□ -1.04
VMP1-204ENST00000587259 KARSQ15046 597 aaKnown RBP8.57□□□□□ -1.04
VMP1-204ENST00000587259 IL17AQ16552 155 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 HYIQ5T013 277 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 CNNM4Q6P4Q7 775 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 PRSS55Q6UWB4 352 aaPredicted RBP8.57□□□□□ -1.04
VMP1-204ENST00000587259 USP49Q70CQ1 688 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 SV2BQ7L1I2 683 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 MRPL10Q7Z7H8 261 aaKnown RBP8.57□□□□□ -1.04
VMP1-204ENST00000587259 PPFIBP1Q86W92 1011 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 RNF149Q8NC42 400 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 SNX29Q8TEQ0 813 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 HASPINQ8TF76 798 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 LARP4BQ92615 738 aaKnown RBP8.57□□□□□ -1.04
VMP1-204ENST00000587259 PGBD4Q96DM1 585 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 CEP170P1Q96L14 293 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 RPS6KC1Q96S38 1066 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 PAAF1Q9BRP4 392 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 HERC2P3Q9BVR0 1158 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 GPR62Q9BZJ7 368 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 CXCL16Q9H2A7 254 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 NXF3Q9H4D5 531 aaKnown RBP8.57□□□□□ -1.04
VMP1-204ENST00000587259 WDR6Q9NNW5 1121 aaKnown RBP8.57□□□□□ -1.04
VMP1-204ENST00000587259 KLK14Q9P0G3 267 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 IMPACTQ9P2X3 320 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 VAV3Q9UKW4 847 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 IPPQ9Y573 584 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 DNAH14Q0VDD8 3507 aa8.57□□□□□ -1.04
VMP1-204ENST00000587259 DOCK6Q96HP0 2047 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 A0A087X0B3 334 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 PVALEFA0A1B0GWK0 134 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 BICDL2A1A5D9 508 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 ESPNB1AK53 854 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 PSMA7O14818 248 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 TGM5O43548 720 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 TSPAN1O60635 241 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 RHOBTB3O94955 611 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 KIF20AO95235 890 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 GLUD1P00367 558 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 SKIP12755 728 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 ITGA4P13612 1032 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 IGFBP6P24592 240 aaPredicted RBP8.56□□□□□ -1.04
VMP1-204ENST00000587259 AFMP43652 599 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 GLUD2P49448 558 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 RAB27AP51159 221 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 EMC2Q15006 297 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 COBLL1Q53SF7 1204 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 KIAA0319Q5VV43 1072 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 NCAPH2Q6IBW4 605 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 C15orf39Q6ZRI6 1047 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 FAM43BQ6ZT52 329 aaPredicted RBP8.56□□□□□ -1.04
VMP1-204ENST00000587259 DRC7Q8IY82 874 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 ASAP3Q8TDY4 903 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 DYDC2Q96IM9 177 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 C7orf25Q9BPX7 421 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 HINFPQ9BQA5 517 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 RTP3Q9BQQ7 232 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 TMEM175Q9BSA9 504 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 INO80BQ9C086 356 aaPredicted RBP8.56□□□□□ -1.04
VMP1-204ENST00000587259 EXOC1Q9NV70 894 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 USP20Q9Y2K6 914 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 ZKSCAN5Q9Y2L8 839 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 MTF2Q9Y483 593 aaPredicted RBP8.56□□□□□ -1.04
VMP1-204ENST00000587259 NUMBLQ9Y6R0 609 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 CACNA1AO00555 2505 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 NCOR2Q9Y618 2525 aa8.56□□□□□ -1.04
VMP1-204ENST00000587259 DOCK8Q8NF50 2099 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 ADAM12O43184 909 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 EFEMP2O95967 443 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 LMNAP02545 664 aaKnown RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 ADH1AP07327 375 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 SP9P0CG40 484 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 CD72P21854 359 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 QARSP47897 775 aaKnown RBP8.55□□□□□ -1.04
VMP1-204ENST00000587259 GPC5P78333 572 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 FOXK2Q01167 660 aa8.55□□□□□ -1.04
VMP1-204ENST00000587259 DSC1Q08554 894 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms