RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 RPAINQ86UA6 219 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 EGFL6Q8IUX8 553 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 LPAR1Q92633 364 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RMDN3Q96TC7 470 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 C1orf112Q9NSG2 853 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ABCF3Q9NUQ8 709 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CTNNAL1Q9UBT7 734 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ANAPC5Q9UJX4 755 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 R3HDM2Q9Y2K5 976 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 USP15Q9Y4E8 981 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CD2APQ9Y5K6 639 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ADGRA3Q8IWK6 1321 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TCP11X1B4DZS4 312 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 HNRNPDLO14979 420 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 THAP12O43422 761 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 GARTP22102 1010 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ADCY8P40145 1251 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SOX10P56693 466 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CCDC63Q8NA47 563 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RDM1Q8NG50 284 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MGARPQ8TDB4 240 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SCLT1Q96NL6 688 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MOV10L1Q9BXT6 1211 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PXMP2Q9NR77 195 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 FGFR1OP2Q9NVK5 253 aa15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-237ENST00000585163 C21orf2O43822 256 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PROSCO94903 275 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CYP1A1P04798 512 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 NSFP46459 744 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 FAM133BQ5BKY9 247 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ZNF516Q92618 1163 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 FAM213AQ9BRX8 229 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 NINJ2Q9NZG7 142 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PCDHA10Q9Y5I2 948 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 UMODL1Q5DID0 1318 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TESPA1A2RU30 521 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CFAP73A6NFT4 308 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RALAP11233 206 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SLC8A1P32418 973 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 BPIFB4P59827 614 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CLDN10P78369 228 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CCNG2Q16589 344 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 LLGL2Q6P1M3 1020 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MON1BQ7L1V2 547 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CEP57Q86XR8 500 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RELL1Q8IUW5 271 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CKAP2Q8WWK9 683 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CEP170P1Q96L14 293 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 DNAJC17Q9NVM6 304 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 LGALS13Q9UHV8 139 aa15.11■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PSTPIP1O43586 416 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SUN1O94901 812 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ATP6V1G2O95670 118 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 BRAFP15056 766 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MPP2Q14168 576 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 NUGGCQ68CJ6 796 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PHLDB2Q86SQ0 1253 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 FAM84AQ96KN4 292 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 SENP7Q9BQF6 1050 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 KCNK9Q9NPC2 374 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 AGAP1Q9UPQ3 857 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ZNF862O60290 1169 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 UBOX5O94941 541 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 STBD1O95210 358 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 APBA3O96018 575 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 KCNA4P22459 653 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RTP1P59025 263 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 NEDD9Q14511 834 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 GALNTL6Q49A17 601 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 C2CD6Q53TS8 623 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 DAB2IPQ5VWQ8 1189 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CCDC89Q8N998 374 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 BBOF1Q8ND07 529 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PWWP2AQ96N64 755 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 HEMGNQ9BXL5 484 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 KIAA1683Q9H0B3 1180 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 PDLIM7Q9NR12 457 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 MCM8Q9UJA3 840 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 WDR81Q562E7 1941 aa15.1■□□□□ 0.01
CDK5RAP3-237ENST00000585163 FOXO6A8MYZ6 492 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 O00370 1275 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CDH16O75309 829 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 VPS41P49754 854 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RIPK1Q13546 671 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ZACNQ401N2 412 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ARHGEF16Q5VV41 709 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 TAS1R3Q7RTX0 852 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 RHOT1Q8IXI2 618 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CYP4X1Q8N118 509 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 GBP7Q8N8V2 638 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 ANKRD42Q8N9B4 389 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 FAM212AQ96EL1 285 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 NOD2Q9HC29 1040 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 GABBR1Q9UBS5 961 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 GH1P01241 217 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 FDX1P10109 184 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 CETPP11597 493 aa15.09■□□□□ 0.01
CDK5RAP3-237ENST00000585163 WDR44Q5JSH3 913 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms