RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SV2AQ7L0J3 742 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 HERC6Q8IVU3 1022 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 OR5B17Q8NGF7 314 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 ZNF516Q92618 1163 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 TBC1D13Q9NVG8 400 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 ITGA11Q9UKX5 1188 aa19.78■□□□□ 0.76
RFFL-211ENST00000584541 CBFA2T2O43439 604 aa19.77■□□□□ 0.76
RFFL-211ENST00000584541 C4BPAP04003 597 aaKnown RBP19.77■□□□□ 0.76
RFFL-211ENST00000584541 TUSC3Q13454 348 aa19.77■□□□□ 0.76
RFFL-211ENST00000584541 TRPC3Q13507 836 aa19.77■□□□□ 0.76
RFFL-211ENST00000584541 ZACNQ401N2 412 aa19.77■□□□□ 0.76
RFFL-211ENST00000584541 PAN2Q504Q3 1202 aaKnown RBP19.77■□□□□ 0.76
RFFL-211ENST00000584541 TRAPPC11Q7Z392 1133 aa19.77■□□□□ 0.76
RFFL-211ENST00000584541 TMCO2Q7Z6W1 182 aaPredicted RBP19.77■□□□□ 0.76
RFFL-211ENST00000584541 CMTR2Q8IYT2 770 aaKnown RBP19.77■□□□□ 0.76
RFFL-211ENST00000584541 C18orf25Q96B23 403 aaPredicted RBP19.77■□□□□ 0.76
RFFL-211ENST00000584541 TUBGCP4Q9UGJ1 667 aa19.77■□□□□ 0.76
RFFL-211ENST00000584541 PLAGL2Q9UPG8 496 aa19.77■□□□□ 0.76
RFFL-211ENST00000584541 INSL6Q9Y581 213 aa19.77■□□□□ 0.76
RFFL-211ENST00000584541 LGALS16A8MUM7 142 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 PMM2O15305 246 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 KRT19P08727 400 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 BMP8BP34820 402 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 PIK3CAP42336 1068 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 BTG3Q14201 252 aaPredicted RBP19.76■□□□□ 0.75
RFFL-211ENST00000584541 GSE1Q14687 1217 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 CBWD6Q4V339 395 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 CBWD3Q5JTY5 395 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 CBWD5Q5RIA9 395 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 TDRD10Q5VZ19 366 aaKnown RBP19.76■□□□□ 0.75
RFFL-211ENST00000584541 APTXQ7Z2E3 356 aaKnown RBP19.76■□□□□ 0.75
RFFL-211ENST00000584541 CCDC150Q8NCX0 1101 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 ZNF689Q96CS4 500 aaPredicted RBP19.76■□□□□ 0.75
RFFL-211ENST00000584541 DDX27Q96GQ7 796 aaKnown RBP19.76■□□□□ 0.75
RFFL-211ENST00000584541 UROC1Q96N76 676 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 IFNKQ9P0W0 207 aa19.76■□□□□ 0.75
RFFL-211ENST00000584541 GBF1Q92538 1859 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 A0A1B0GTH6 734 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 GTPBP10A4D1E9 387 aaKnown RBP19.75■□□□□ 0.75
RFFL-211ENST00000584541 TLL1O43897 1013 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 CLSTN1O94985 981 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 ITGB3P05106 788 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 LRPAP1P30533 357 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 RPL9P32969 192 aaKnown RBP19.75■□□□□ 0.75
RFFL-211ENST00000584541 RBP5P82980 135 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 HTRA4P83105 476 aaPredicted RBP19.75■□□□□ 0.75
RFFL-211ENST00000584541 UBXN1Q04323 297 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 NAB2Q15742 525 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 SARM1Q6SZW1 724 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 GBP6Q6ZN66 633 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 C15orf39Q6ZRI6 1047 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 C1orf127Q8N9H9 656 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 FBXL13Q8NEE6 735 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 RAD9AQ99638 391 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 IMPG2Q9BZV3 1241 aa19.75■□□□□ 0.75
RFFL-211ENST00000584541 RTN4Q9NQC3 1192 aaKnown RBP19.75■□□□□ 0.75
RFFL-211ENST00000584541 CARNS1A5YM72 827 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 CASTOR2A6NHX0 329 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 POLR2BP30876 1174 aaKnown RBP19.74■□□□□ 0.75
RFFL-211ENST00000584541 GUCY2FP51841 1108 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 SOX4Q06945 474 aaPredicted RBP19.74■□□□□ 0.75
RFFL-211ENST00000584541 DSC1Q08554 894 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 NCOA4Q13772 614 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 SPOUT1Q5T280 376 aaKnown RBP19.74■□□□□ 0.75
RFFL-211ENST00000584541 FAM84AQ96KN4 292 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 ZNF560Q96MR9 790 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 TRIM5Q9C035 493 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 GRPEL1Q9HAV7 217 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 RC3H2Q9HBD1 1191 aaKnown RBP19.74■□□□□ 0.75
RFFL-211ENST00000584541 GOLGA2P5Q9HBQ8 144 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 AGAP1Q9UPQ3 857 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 COQ4Q9Y3A0 265 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 COL4A6Q14031 1691 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 KIAA1671Q9BY89 1806 aa19.74■□□□□ 0.75
RFFL-211ENST00000584541 FSD2A1L4K1 749 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 ZC3H11AO75152 810 aaKnown RBP eCLIP19.73■□□□□ 0.75
RFFL-211ENST00000584541 DDHD2O94830 711 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 HLA-DRAP01903 254 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 PNPLA4P41247 253 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 MYO1EQ12965 1108 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 WDR44Q5JSH3 913 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 C9orf57Q5W0N0 161 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 ZNF280BQ86YH2 543 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 COLGALT2Q8IYK4 626 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 FIBCD1Q8N539 461 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 TAS1R2Q8TE23 839 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 PCMTD1Q96MG8 357 aaPredicted RBP19.73■□□□□ 0.75
RFFL-211ENST00000584541 NAP1L5Q96NT1 182 aaPredicted RBP19.73■□□□□ 0.75
RFFL-211ENST00000584541 TMEM175Q9BSA9 504 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 XPO4Q9C0E2 1151 aaKnown RBP19.73■□□□□ 0.75
RFFL-211ENST00000584541 NRDE2Q9H7Z3 1164 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 RAB20Q9NX57 234 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 GCNT4Q9P109 453 aa19.73■□□□□ 0.75
RFFL-211ENST00000584541 ANO9A1A5B4 782 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 PODXLO00592 558 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 ALDH2P05091 517 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 ATICP31939 592 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 OR1G1P47890 313 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 CLCNKBP51801 687 aa19.72■□□□□ 0.75
RFFL-211ENST00000584541 NR1I3Q14994 352 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms