RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 WDR6Q9NNW5 1121 aaKnown RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 SRPK3Q9UPE1 567 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 PDCD11Q14690 1871 aaKnown RBP12.31□□□□□ -0.44
CCDC47-206ENST00000584112 DOPEY2Q9Y3R5 2298 aa12.31□□□□□ -0.44
CCDC47-206ENST00000584112 MED24O75448 989 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 CTSAP10619 480 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 LAMP2P13473 410 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 GLRA2P23416 452 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 TPRG1Q6ZUI0 275 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 VPS52Q8N1B4 723 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 ASAP3Q8TDY4 903 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 FGF14Q92915 247 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 RAB34Q9BZG1 259 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 ZBP1Q9H171 429 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 CSRNP2Q9H175 543 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 DNAJB4Q9UDY4 337 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 IPPQ9Y573 584 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 IRAK3Q9Y616 596 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 STK24Q9Y6E0 443 aa12.3□□□□□ -0.44
CCDC47-206ENST00000584112 PTPRQQ9UMZ3 2332 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 ARHGEF35A5YM69 484 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 LRRIQ4A6NIV6 560 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 ALDH2P05091 517 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 ARF4P18085 180 aaPredicted RBP12.29□□□□□ -0.44
CCDC47-206ENST00000584112 U2AF2P26368 475 aaKnown RBP eCLIP12.29□□□□□ -0.445e-6■□□□□ 9.7
CCDC47-206ENST00000584112 SLC11A1P49279 550 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.442e-9■■■■■ 41.7
CCDC47-206ENST00000584112 SATB1Q01826 763 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 AMHR2Q16671 573 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 PARM1Q6UWI2 310 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 ZBTB8OSQ8IWT0 167 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 SMG8Q8ND04 991 aaKnown RBP12.29□□□□□ -0.44
CCDC47-206ENST00000584112 DEFB124Q8NES8 71 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 CPB2Q96IY4 423 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 PRIMPOLQ96LW4 560 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 UBL7Q96S82 380 aaPredicted RBP12.29□□□□□ -0.44
CCDC47-206ENST00000584112 EDEM2Q9BV94 578 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 EIF2AQ9BY44 585 aaKnown RBP12.29□□□□□ -0.44
CCDC47-206ENST00000584112 FAN1Q9Y2M0 1017 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 GIT1Q9Y2X7 761 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 ZMYM2Q9UBW7 1377 aa12.29□□□□□ -0.44
CCDC47-206ENST00000584112 SHISA7A6NL88 538 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 LAD1O00515 517 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 INPPL1O15357 1258 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 NR1I2O75469 434 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 DDHD2O94830 711 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 POMCP01189 267 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 CEACAM1P13688 526 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 PPP2R5AQ15172 486 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 SLC27A1Q6PCB7 646 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 C15orf39Q6ZRI6 1047 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 GET4Q7L5D6 327 aaPredicted RBP12.28□□□□□ -0.44
CCDC47-206ENST00000584112 MAEAQ7L5Y9 396 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 PPFIBP1Q86W92 1011 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 TMEM173Q86WV6 379 aaPredicted RBP12.28□□□□□ -0.44
CCDC47-206ENST00000584112 ZNF280BQ86YH2 543 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 C2orf40Q9H1Z8 148 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
CCDC47-206ENST00000584112 PRMT7Q9NVM4 692 aaPredicted RBP12.28□□□□□ -0.44
CCDC47-206ENST00000584112 KCNK4Q9NYG8 393 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
CCDC47-206ENST00000584112 LRWD1Q9UFC0 647 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 VWA8A3KMH1 1905 aa12.28□□□□□ -0.44
CCDC47-206ENST00000584112 CREBBPQ92793 2442 aa12.27□□□□□ -0.44
CCDC47-206ENST00000584112 A0A087WWV3 80 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 ARL5CA6NH57 179 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 EPN2O95208 641 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 CYP11B2P19099 503 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 CCT6AP40227 531 aaKnown RBP12.27□□□□□ -0.45
CCDC47-206ENST00000584112 MLH1P40692 756 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 NAMPTP43490 491 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 PDIA5Q14554 519 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 FAM187BQ17R55 369 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 PLA2G2CQ5R387 149 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 CDCA2Q69YH5 1023 aaPredicted RBP12.27□□□□□ -0.45
CCDC47-206ENST00000584112 PADI6Q6TGC4 694 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 BCL7CQ8WUZ0 217 aaPredicted RBP12.27□□□□□ -0.45
CCDC47-206ENST00000584112 STAMQ92783 540 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 GAD1Q99259 594 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 EMILIN2Q9BXX0 1053 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 CHRDQ9H2X0 955 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 GPRC5CQ9NQ84 441 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 NDRG2Q9UN36 371 aaKnown RBP12.27□□□□□ -0.45
CCDC47-206ENST00000584112 SSX2IPQ9Y2D8 614 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 C2CD3Q4AC94 2353 aa12.27□□□□□ -0.45
CCDC47-206ENST00000584112 CCDC195A0A1B0GUA6 201 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 A0A1B0GUA9 196 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 TK2O00142 265 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 NRP1O14786 923 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 N4BP3O15049 544 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 NCAM2O15394 837 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 B4GALT5O43286 388 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 B4GALT3O60512 393 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 NPTXRO95502 500 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 OR1G1P47890 313 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 MCM2P49736 904 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 SCNN1GP51170 649 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 CLCN4P51793 760 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms