RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 ZNF334Q9HCZ1 680 aaPredicted RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 WRAP73Q9P2S5 460 aaPredicted RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 TFIP11Q9UBB9 837 aaKnown RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 COL4A3BPQ9Y5P4 624 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 ASH1LQ9NR48 2969 aaKnown RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 ADAMTS20P59510 1910 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 SLC38A8A6NNN8 435 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 C4orf47A7E2U8 309 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 I3L4J1 428 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 TRAK2O60296 914 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 TSPAN1O60635 241 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 GAS7O60861 476 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 HNRNPA1P09651 372 aaKnown RBP eCLIP12.67□□□□□ -0.38
NUP85-224ENST00000583948 ZNF806P0C7X5 589 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 KRT2P35908 639 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 DNM2P50570 870 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 LIMK1P53667 647 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 NLRP5P59047 1200 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
NUP85-224ENST00000583948 LAMTOR4Q0VGL1 99 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 LRCH2Q5VUJ6 765 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 MIER3Q7Z3K6 550 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 MAP4K3Q8IVH8 894 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 DIS3L2Q8IYB7 885 aaKnown RBP12.67□□□□□ -0.38
NUP85-224ENST00000583948 INO80BQ9C086 356 aaPredicted RBP12.67□□□□□ -0.38
NUP85-224ENST00000583948 BRMS1Q9HCU9 246 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.67□□□□□ -0.38
NUP85-224ENST00000583948 SNTG2Q9NY99 539 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 STK39Q9UEW8 545 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 USP20Q9Y2K6 914 aa12.67□□□□□ -0.38
NUP85-224ENST00000583948 CARNS1A5YM72 827 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 EML1O00423 815 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 DCLK1O15075 740 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 XYLBO75191 536 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 NPTXRO95502 500 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 HSP90AA2PQ14568 343 aaPredicted RBP12.66□□□□□ -0.38
NUP85-224ENST00000583948 XKR3Q5GH77 459 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 SH3PXD2AQ5TCZ1 1133 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 RNF43Q68DV7 783 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 RNF149Q8NC42 400 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 SLC5A5Q92911 643 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 ZFYVE19Q96K21 471 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 SPATA32Q96LK8 384 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 BBC3Q96PG8 261 aaPredicted RBP12.66□□□□□ -0.38
NUP85-224ENST00000583948 CORO1BQ9BR76 489 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 TTPALQ9BTX7 342 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 TRMT61BQ9BVS5 477 aaKnown RBP12.66□□□□□ -0.38
NUP85-224ENST00000583948 PARP2Q9UGN5 583 aa12.66□□□□□ -0.38
NUP85-224ENST00000583948 BTBD18B2RXH4 712 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 MAN2B1O00754 1011 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 HYAL3O43820 417 aaPredicted RBP12.65□□□□□ -0.38
NUP85-224ENST00000583948 TDP2O95551 362 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 SETQ01105 290 aaPredicted RBP12.65□□□□□ -0.38
NUP85-224ENST00000583948 PTGDRQ13258 359 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 SKOR2Q2VWA4 1001 aaPredicted RBP12.65□□□□□ -0.38
NUP85-224ENST00000583948 PRSS36Q5K4E3 855 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 SPEM1Q8N4L4 309 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 OXER1Q8TDS5 423 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 PIK3R5Q8WYR1 880 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 RSPH1Q8WYR4 309 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 TEKT3Q9BXF9 490 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 SCAND2PQ9GZW5 306 aaPredicted RBP12.65□□□□□ -0.38
NUP85-224ENST00000583948 KLK13Q9UKR3 277 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 CFAP45Q9UL16 551 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 INVSQ9Y283 1065 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 CDY1Q9Y6F8 540 aa12.65□□□□□ -0.38
NUP85-224ENST00000583948 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 MOSPD3O75425 235 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 PSMD10O75832 226 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 EPN2O95208 641 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 U2AF2P26368 475 aaKnown RBP eCLIP12.64□□□□□ -0.39
NUP85-224ENST00000583948 CIITAP33076 1130 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 NR5A1Q13285 461 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 PPP2R5DQ14738 602 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 PON2Q15165 354 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 AMHR2Q16671 573 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 PLA2G2CQ5R387 149 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 ATL3Q6DD88 541 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 MAMSTRQ6ZN01 415 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 NOSTRINQ8IVI9 506 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 LEO1Q8WVC0 666 aaPredicted RBP12.64□□□□□ -0.39
NUP85-224ENST00000583948 DNASE1L2Q92874 299 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 ASB16Q96NS5 453 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 USP28Q96RU2 1077 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 FOXP1Q9H334 677 aaPredicted RBP12.64□□□□□ -0.39
NUP85-224ENST00000583948 ZFP14Q9HCL3 533 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 SH3GLB2Q9NR46 395 aa12.64□□□□□ -0.39
NUP85-224ENST00000583948 A0A087WWV3 80 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 WDR27A2RRH5 827 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 ARNTLO00327 626 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 PTGESO14684 152 aa12.63□□□□□ -0.39
NUP85-224ENST00000583948 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
NUP85-224ENST00000583948 NR1I2O75469 434 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms