RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 C17orf75Q9HAS0 396 aa19.51■□□□□ 0.71
SNX11-212ENST00000583320 SLC39A2Q9NP94 309 aa19.51■□□□□ 0.71
SNX11-212ENST00000583320 MAN1C1Q9NR34 630 aa19.51■□□□□ 0.71
SNX11-212ENST00000583320 KCNG1Q9UIX4 513 aa19.51■□□□□ 0.71
SNX11-212ENST00000583320 USO1O60763 962 aaKnown RBP19.5■□□□□ 0.71
SNX11-212ENST00000583320 HIP1RO75146 1068 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 LRRN2O75325 713 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 OFD1O75665 1012 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 TMOD1P28289 359 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 RFC5P40937 340 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 AFF1P51825 1210 aaKnown RBP19.5■□□□□ 0.71
SNX11-212ENST00000583320 NPEPPSP55786 919 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 CACNB1Q02641 598 aaPredicted RBP19.5■□□□□ 0.71
SNX11-212ENST00000583320 RAD51AP2Q09MP3 1159 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 TARBP2Q15633 366 aaKnown RBP19.5■□□□□ 0.71
SNX11-212ENST00000583320 PLA2G4FQ68DD2 849 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 KLHL10Q6JEL2 608 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 SARM1Q6SZW1 724 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 SFR1Q86XK3 245 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 KIFAP3Q92845 792 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 MED15Q96RN5 788 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 FOXQ1Q9C009 403 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 WDR6Q9NNW5 1121 aaKnown RBP19.5■□□□□ 0.71
SNX11-212ENST00000583320 LARSQ9P2J5 1176 aaKnown RBP19.5■□□□□ 0.71
SNX11-212ENST00000583320 EPS15L1Q9UBC2 864 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 CTNND2Q9UQB3 1225 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 CLUHO75153 1309 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 UBE4BO95155 1302 aa19.5■□□□□ 0.71
SNX11-212ENST00000583320 EIF3DO15371 548 aaKnown RBP eCLIP19.49■□□□□ 0.71
SNX11-212ENST00000583320 RFPL2O75678 378 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 DDHD2O94830 711 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 SRFP11831 508 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 ALCAMQ13740 583 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 BMT2Q1RMZ1 405 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 CENPPQ6IPU0 288 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 GLB1LQ6UWU2 654 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 STXBP4Q6ZWJ1 553 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 EPM2AIP1Q7L775 607 aaPredicted RBP19.49■□□□□ 0.71
SNX11-212ENST00000583320 C1orf210Q8IVY1 113 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 DAW1Q8N136 415 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 MYCT1Q8N699 235 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 CMASQ8NFW8 434 aaPredicted RBP19.49■□□□□ 0.71
SNX11-212ENST00000583320 NOC3LQ8WTT2 800 aaKnown RBP19.49■□□□□ 0.71
SNX11-212ENST00000583320 CEP89Q96ST8 783 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 TRAIPQ9BWF2 469 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 EMILIN2Q9BXX0 1053 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 ZHX3Q9H4I2 956 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 ARHGEF3Q9NR81 526 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 NFE2L3Q9Y4A8 694 aa19.49■□□□□ 0.71
SNX11-212ENST00000583320 CCDC195A0A1B0GUA6 201 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 TMEM150BA6NC51 233 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 C2CD2LO14523 706 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 PLS3P13797 630 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 RNASELQ05823 741 aaKnown RBP19.48■□□□□ 0.71
SNX11-212ENST00000583320 LRRC63Q05C16 580 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 TWF2Q6IBS0 349 aaKnown RBP19.48■□□□□ 0.71
SNX11-212ENST00000583320 PHLDB3Q6NSJ2 640 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 ZC3H14Q6PJT7 736 aaKnown RBP19.48■□□□□ 0.71
SNX11-212ENST00000583320 HPS3Q969F9 1004 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 ZNF707Q96C28 371 aaPredicted RBP19.48■□□□□ 0.71
SNX11-212ENST00000583320 ST6GALNAC4Q9H4F1 302 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 DHX33Q9H6R0 707 aaKnown RBP19.48■□□□□ 0.71
SNX11-212ENST00000583320 MAPK8IP1Q9UQF2 711 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 PIN4Q9Y237 131 aaKnown RBP19.48■□□□□ 0.71
SNX11-212ENST00000583320 SIT1Q9Y3P8 196 aa19.48■□□□□ 0.71
SNX11-212ENST00000583320 INPPL1O15357 1258 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 GAS2O43903 313 aaKnown RBP19.47■□□□□ 0.71
SNX11-212ENST00000583320 ZNF18P17022 549 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 SCP2P22307 547 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 DEKP35659 375 aaKnown RBP19.47■□□□□ 0.71
SNX11-212ENST00000583320 MTERF2Q49AM1 385 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 TTI2Q6NXR4 508 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 TAS1R1Q7RTX1 841 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 ZNF507Q8TCN5 953 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 FIZ1Q96SL8 496 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 JPH2Q9BR39 696 aaPredicted RBP19.47■□□□□ 0.71
SNX11-212ENST00000583320 HSD3B7Q9H2F3 369 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 MRPL44Q9H9J2 332 aaKnown RBP19.47■□□□□ 0.71
SNX11-212ENST00000583320 CHST12Q9NRB3 414 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 FAM105AQ9NUU6 356 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 FANCLQ9NW38 375 aa19.47■□□□□ 0.71
SNX11-212ENST00000583320 A0A087WZ62 844 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 TEX28O15482 410 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 ABCD1P33897 745 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 STX17P56962 302 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 TPD52L1Q16890 204 aaPredicted RBP19.46■□□□□ 0.71
SNX11-212ENST00000583320 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 AGMOQ6ZNB7 445 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 ZNF720Q7Z2F6 126 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 ZNF710Q8N1W2 664 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 PJA1Q8NG27 643 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 SCFD1Q8WVM8 642 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 SPIRE2Q8WWL2 714 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 SLC7A3Q8WY07 619 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 KCNN1Q92952 543 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 FDXACB1Q9BRP7 624 aaPredicted RBP19.46■□□□□ 0.71
SNX11-212ENST00000583320 GCOM2Q9BZD3 368 aaPredicted RBP19.46■□□□□ 0.71
SNX11-212ENST00000583320 XPNPEP1Q9NQW7 623 aa19.46■□□□□ 0.71
SNX11-212ENST00000583320 MRPL17Q9NRX2 175 aaKnown RBP19.46■□□□□ 0.71
SNX11-212ENST00000583320 MARCH5Q9NX47 278 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms