RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 KNOP1Q1ED39 458 aaKnown RBP22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 USP41Q3LFD5 358 aa22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 RTP2Q5QGT7 225 aa22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 CBWD2Q8IUF1 395 aa22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 GLYCTKQ8IVS8 523 aa22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 SMYD4Q8IYR2 804 aaPredicted RBP22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 GPD1LQ8N335 351 aa22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 DDX27Q96GQ7 796 aaKnown RBP22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 MRPL17Q9NRX2 175 aaKnown RBP22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 CHST7Q9NS84 486 aa22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 UBQLN1Q9UMX0 589 aaKnown RBP22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 UBE4BO95155 1302 aa22.46■■□□□ 1.19
PPP4R1-221ENST00000582240 REV3LO60673 3130 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 LDHAP00338 332 aaKnown RBP22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 NDUFV1P49821 464 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 DSG1Q02413 1049 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 TMEM132DQ14C87 1099 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 SCARA3Q6AZY7 606 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 ISM2Q6H9L7 571 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 BRSK2Q8IWQ3 736 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 CD302Q8IX05 232 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 EFCAB13Q8IY85 973 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 TIGD1Q96MW7 591 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 APOL5Q9BWW9 433 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 PDE11AQ9HCR9 933 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 RBAKQ9NYW8 714 aaPredicted RBP22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 CLEC1BQ9P126 229 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 PCDHA5Q9Y5H7 936 aa22.45■■□□□ 1.18
PPP4R1-221ENST00000582240 SF3B1O75533 1304 aaKnown RBP eCLIP22.45■■□□□ 1.184e-6■■■■■ 34.5
PPP4R1-221ENST00000582240 KINO60870 393 aaKnown RBP22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 EPCAMP16422 314 aa22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 KLRC2P26717 231 aa22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 TKTP29401 623 aaKnown RBP22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 RPL9P32969 192 aaKnown RBP22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 MRPS5P82675 430 aaKnown RBP22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 KCNB1Q14721 858 aa22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 SPATA1Q5VX52 437 aa22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 LMBRD2Q68DH5 695 aaPredicted RBP22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 BEST2Q8NFU1 509 aa22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 ASB7Q9H672 318 aa22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 IRAK3Q9Y616 596 aa22.44■■□□□ 1.18
PPP4R1-221ENST00000582240 TMEM189-UBE2V1I3L0A0 370 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 TEX28O15482 410 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 NCK2O43639 380 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 UBE2HP62256 183 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 HS2ST1Q7LGA3 356 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 ATXN2LQ8WWM7 1075 aaKnown RBP22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 CCDC34Q96HJ3 373 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 ASB2Q96Q27 587 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 CDCA3Q99618 268 aaPredicted RBP22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 TTPALQ9BTX7 342 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 KCTD10Q9H3F6 313 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 NUB1Q9Y5A7 615 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 HCFC2Q9Y5Z7 792 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 CITO14578 2027 aa22.43■■□□□ 1.18
PPP4R1-221ENST00000582240 ZNF233A6NK53 670 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 IL18RAPO95256 599 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 CYP3A5P20815 502 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 LRPAP1P30533 357 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 MCM4P33991 863 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 TFAMQ00059 246 aaKnown RBP22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 KCNC3Q14003 757 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 PALB2Q86YC2 1186 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 LNX1Q8TBB1 728 aaPredicted RBP22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 SLC22A17Q8WUG5 538 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 SMARCE1Q969G3 411 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 EMILIN2Q9BXX0 1053 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 RXFP1Q9HBX9 757 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 DPP3Q9NY33 737 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 STK39Q9UEW8 545 aa22.42■■□□□ 1.18
PPP4R1-221ENST00000582240 ADAM12O43184 909 aa22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 XPOTO43592 962 aaKnown RBP22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 SPATA31D3P0C874 917 aa22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 FGFR3P22607 806 aa22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 LEXMQ3ZCV2 418 aa22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 C9orf57Q5W0N0 161 aa22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 SPATA31D4Q6ZUB0 917 aa22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 C12orf76Q8N812 135 aaPredicted RBP22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 XXYLT1Q8NBI6 393 aa22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 FEZF2Q8TBJ5 459 aa22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 DERAQ9Y315 318 aa22.41■■□□□ 1.18
PPP4R1-221ENST00000582240 PTPRJQ12913 1337 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 KIAA0391O15091 583 aaKnown RBP22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 SMC2O95347 1197 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 POU5F1Q01860 360 aaKnown RBP22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 ELAVL2Q12926 359 aaKnown RBP22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 PSMD5Q16401 504 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 CAMK4Q16566 473 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 RSPO2Q6UXX9 243 aaPredicted RBP22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 MSLNLQ96KJ4 702 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 FBXL18Q96ME1 805 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 POP1Q99575 1024 aaKnown RBP22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 CD207Q9UJ71 328 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 CDH22Q9UJ99 828 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 SSX2IPQ9Y2D8 614 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 C2CD2Q9Y426 696 aa22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 TIMM13Q9Y5L4 95 aaPredicted RBP22.4■■□□□ 1.18
PPP4R1-221ENST00000582240 PRUNE2Q8WUY3 3088 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms