RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 NR1I3Q14994 352 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 SHHQ15465 462 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 FILIP1LQ4L180 1135 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 CBWD6Q4V339 395 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 CBWD3Q5JTY5 395 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 GLRA4Q5JXX5 417 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 CBWD5Q5RIA9 395 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 C9orf50Q5SZB4 431 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 TDRD10Q5VZ19 366 aaKnown RBP12.43□□□□□ -0.42
GGA3-211ENST00000582232 LMBRD2Q68DH5 695 aaPredicted RBP12.43□□□□□ -0.42
GGA3-211ENST00000582232 HERC6Q8IVU3 1022 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 CMTR2Q8IYT2 770 aaKnown RBP12.43□□□□□ -0.42
GGA3-211ENST00000582232 LRRC43Q8N309 656 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 UROC1Q96N76 676 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 UBE2OQ9C0C9 1292 aaKnown RBP12.43□□□□□ -0.42
GGA3-211ENST00000582232 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 VPS16Q9H269 839 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 DPP3Q9NY33 737 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 INPP5FQ9Y2H2 1132 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 INSL6Q9Y581 213 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 SCN1AP35498 2009 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 CARNS1A5YM72 827 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 GOLGA6L3A6NEY3 463 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 TBKBP1A7MCY6 615 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 PIRO00625 290 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 VNN1O95497 513 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 STAU1O95793 577 aaKnown RBP12.42□□□□□ -0.42
GGA3-211ENST00000582232 POMCP01189 267 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 IBSPP21815 317 aaPredicted RBP12.42□□□□□ -0.42
GGA3-211ENST00000582232 PAX3P23760 479 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 GATMP50440 423 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 UBASH3AP57075 661 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 SOX4Q06945 474 aaPredicted RBP12.42□□□□□ -0.42
GGA3-211ENST00000582232 CETN1Q12798 172 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 GSE1Q14687 1217 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 EPC2Q52LR7 807 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 COLGALT2Q8IYK4 626 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 FBXL13Q8NEE6 735 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 SP7Q8TDD2 431 aaPredicted RBP12.42□□□□□ -0.42
GGA3-211ENST00000582232 C18orf25Q96B23 403 aaPredicted RBP12.42□□□□□ -0.42
GGA3-211ENST00000582232 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
GGA3-211ENST00000582232 RNPC3Q96LT9 517 aaKnown RBP12.42□□□□□ -0.42
GGA3-211ENST00000582232 NAP1L5Q96NT1 182 aaPredicted RBP12.42□□□□□ -0.42
GGA3-211ENST00000582232 ERGIC2Q96RQ1 377 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 RAD9AQ99638 391 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 TMEM175Q9BSA9 504 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 VRTNQ9H8Y1 702 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 TUBGCP4Q9UGJ1 667 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 SIX4Q9UIU6 781 aa12.42□□□□□ -0.42
GGA3-211ENST00000582232 A0A1W2PQC6 194 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 AP5Z1O43299 807 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 CBFA2T2O43439 604 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 DDHD2O94830 711 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 CST3P01034 146 aaPredicted RBP12.41□□□□□ -0.42
GGA3-211ENST00000582232 ATICP31939 592 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 RBP5P82980 135 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 MYL7Q01449 175 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 RNASELQ05823 741 aaKnown RBP12.41□□□□□ -0.42
GGA3-211ENST00000582232 BIRC3Q13489 604 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 UPP1Q16831 310 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 FKBP15Q5T1M5 1219 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 C9orf57Q5W0N0 161 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 TMCO2Q7Z6W1 182 aaPredicted RBP12.41□□□□□ -0.42
GGA3-211ENST00000582232 ZNF280BQ86YH2 543 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 LRRC52Q8N7C0 313 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 LMO3Q8TAP4 145 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 TAF4BQ92750 862 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 FAXDC2Q96IV6 333 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 FAM84AQ96KN4 292 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 YME1L1Q96TA2 773 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 CWH43Q9H720 699 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 NRDE2Q9H7Z3 1164 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 RAB20Q9NX57 234 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 IFNKQ9P0W0 207 aa12.41□□□□□ -0.42
GGA3-211ENST00000582232 TMEM189-UBE2V1I3L0A0 370 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 TEX33O43247 280 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 B4GALT3O60512 393 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 ZC3H11AO75152 810 aaKnown RBP eCLIP12.4□□□□□ -0.42
GGA3-211ENST00000582232 PHACTR2O75167 634 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 ASS1P00966 412 aaKnown RBP12.4□□□□□ -0.42
GGA3-211ENST00000582232 HLA-DRAP01903 254 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 ITGB3P05106 788 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 TPM3P06753 285 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 PBX1P40424 430 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 PNPLA4P41247 253 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 GUCY2FP51841 1108 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 UBXN1Q04323 297 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 KCNMA1Q12791 1236 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 NCOA4Q13772 614 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
GGA3-211ENST00000582232 EXOC3L4Q17RC7 722 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 SGSM1Q2NKQ1 1148 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 SMYD5Q6GMV2 418 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 FAM117BQ6P1L5 589 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 DCLRE1AQ6PJP8 1040 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 GBP6Q6ZN66 633 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 EHBP1Q8NDI1 1231 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms