RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 IFT122Q9HBG6 1241 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 LRRC53A6NM62 1247 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 LRRIQ3A6PVS8 624 aaPredicted RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 P4HA2O15460 535 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 CCP110O43303 1012 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 CD52P31358 61 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 MXI1P50539 228 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 NLRP11P59045 1033 aaKnown RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 APBA1Q02410 837 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 TFF2Q03403 129 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 ENPEPQ07075 957 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 PPP3CAQ08209 521 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 TMEM62Q0P6H9 643 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 KLHDC7AQ5VTJ3 777 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 E4F1Q66K89 784 aaPredicted RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 PDXDC1Q6P996 788 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 ZNF410Q86VK4 478 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 CCAR2Q8N163 923 aaKnown RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 CRIPAKQ8N1N5 446 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 PARD3BQ8TEW8 1205 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 LINC01599Q8WXQ3 324 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 BAP1Q92560 729 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 NUCKS1Q9H1E3 243 aaKnown RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 MINDY3Q9H8M7 445 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 TRMT1Q9NXH9 659 aaKnown RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 PADI3Q9ULW8 664 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 RALGAPA2Q2PPJ7 1873 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 H3BNC9 293 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 B4GALT5O43286 388 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 LINC00271P0C7V0 271 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 DLATP10515 647 aaKnown RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 BMP1P13497 986 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 CLCN1P35523 988 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 CDC42EP1Q00587 391 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 MTF1Q14872 753 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 PSMD6Q15008 389 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 FAM187BQ17R55 369 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 ZNF568Q3ZCX4 644 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 C1orf220Q5T0J3 134 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 TRIM65Q6PJ69 517 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 MPZL3Q6UWV2 235 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 RAD9BQ6WBX8 426 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 SRGAP1Q7Z6B7 1085 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 RTN4RL1Q86UN2 441 aaPredicted RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 TMEM192Q8IY95 271 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 ADAMTS19Q8TE59 1207 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 HLA-CQ95604 372 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 ZNF689Q96CS4 500 aaPredicted RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 MRPL38Q96DV4 380 aaKnown RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 FNBP1Q96RU3 617 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 CHP1Q99653 195 aa13.59□□□□□ -0.23
SRSF1-204ENST00000581979 INTS2Q9H0H0 1204 aaKnown RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 RBAKQ9NYW8 714 aaPredicted RBP13.59□□□□□ -0.23
SRSF1-204ENST00000581979 BRWD1Q9NSI6 2320 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 USP27XA6NNY8 438 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 TNFRSF10AO00220 468 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 ZSCAN12O43309 604 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 DGKIO75912 1065 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 UCHL3P15374 230 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 MCCD1P59942 119 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-204ENST00000581979 MCL1Q07820 350 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 RAPGEF1Q13905 1077 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 MEA1Q16626 185 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 KIZQ2M2Z5 673 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 SFMBT2Q5VUG0 894 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 KRT39Q6A163 491 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 WDR59Q6PJI9 974 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 CRELD2Q6UXH1 353 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-204ENST00000581979 TOGARAM2Q6ZUX3 1019 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 EHBP1Q8NDI1 1231 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 PRIMPOLQ96LW4 560 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 SPAG5Q96R06 1193 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 POP1Q99575 1024 aaKnown RBP13.58□□□□□ -0.24
SRSF1-204ENST00000581979 GCOM2Q9BZD3 368 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-204ENST00000581979 TMEM117Q9H0C3 514 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 TMEM8AQ9HCN3 771 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 SIX2Q9NPC8 291 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 KCND1Q9NSA2 647 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 PLAGL2Q9UPG8 496 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 GINS2Q9Y248 185 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 TNFSF13BQ9Y275 285 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 FHOD1Q9Y613 1164 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 NLRC5Q86WI3 1866 aa13.58□□□□□ -0.24
SRSF1-204ENST00000581979 C5orf67F2Z3F1 127 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 OGTO15294 1046 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 CSDE1O75534 798 aaKnown RBP13.57□□□□□ -0.24
SRSF1-204ENST00000581979 ERLIN2O94905 339 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 PROZP22891 400 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 HNRNPH3P31942 346 aaKnown RBP13.57□□□□□ -0.24
SRSF1-204ENST00000581979 GTF2H1P32780 548 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 PAK2Q13177 524 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 SEZ6Q53EL9 994 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 ZBTB41Q5SVQ8 909 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 DPY19L2P1Q6NXN4 242 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 FIBCD1Q8N539 461 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
SRSF1-204ENST00000581979 DESI2Q9BSY9 194 aa13.57□□□□□ -0.24
SRSF1-204ENST00000581979 CNTNAP2Q9UHC6 1331 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms