RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 LRPAP1P30533 357 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 FXR1P51114 621 aaKnown RBP eCLIP16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 CLCNKBP51801 687 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 VAMP7P51809 220 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 AP3M2P53677 418 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 WNT7BP56706 349 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 ENPEPQ07075 957 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 UPP1Q16831 310 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 EFCAB13Q8IY85 973 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 RABGGTAQ92696 567 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 GOLGA2P5Q9HBQ8 144 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 METTL14Q9HCE5 456 aaKnown RBP16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 INTS13Q9NVM9 706 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 TUBGCP4Q9UGJ1 667 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 R3HCC1Q9Y3T6 440 aaKnown RBP16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 B3GAT3O94766 335 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 ITGB1P05556 798 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 UBE3AQ05086 875 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 GRIN2CQ14957 1233 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 FRMD5Q7Z6J6 570 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 DDX53Q86TM3 631 aaKnown RBP16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 SPPL3Q8TCT6 385 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 POP1Q99575 1024 aaKnown RBP16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 PAAF1Q9BRP4 392 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 NAT10Q9H0A0 1025 aaKnown RBP16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 ALG13Q9NP73 1137 aaKnown RBP16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 CACNG4Q9UBN1 327 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 ADAM28Q9UKQ2 775 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 LZTS1Q9Y250 596 aa16.83■□□□□ 0.28
SLC6A4-205ENST00000579221 SYCE3A1L190 88 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 LRRIQ3A6PVS8 624 aaPredicted RBP16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 TMEM189-UBE2V1I3L0A0 370 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 RFXAPO00287 272 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 IKBKBO14920 756 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 TRAPPC3O43617 180 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 PAX3P23760 479 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 GUCY2FP51841 1108 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 CLDN10P78369 228 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 RBP5P82980 135 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 BFSP1Q12934 665 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 BMS1Q14692 1282 aaKnown RBP16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 ZSCAN23Q3MJ62 389 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 CCDC40Q4G0X9 1142 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 C9orf57Q5W0N0 161 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 LMBRD2Q68DH5 695 aaPredicted RBP16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 ENOX1Q8TC92 643 aaKnown RBP16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 PLEKHO2Q8TD55 490 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 POF1BQ8WVV4 589 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 BORCS6Q96GS4 357 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 FAM161BQ96MY7 647 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 MED15Q96RN5 788 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 LMAN2LQ9H0V9 348 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 PRDM12Q9H4Q4 367 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 MARCH5Q9NX47 278 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 ARMCX3Q9UH62 379 aaPredicted RBP16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 ITGA11Q9UKX5 1188 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 GBF1Q92538 1859 aa16.82■□□□□ 0.28
SLC6A4-205ENST00000579221 ANO9A1A5B4 782 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 EPOPA6NHQ4 379 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 PIRO00625 290 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 GRM6O15303 877 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 STX10O60499 249 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 PHACTR2O75167 634 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 MCCD1P59942 119 aaPredicted RBP16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 DLG4P78352 724 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 ELAVL2Q12926 359 aaKnown RBP16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 PTPROQ16827 1216 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 TRAPPC11Q7Z392 1133 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 DEFB123Q8N688 67 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 OR5B17Q8NGF7 314 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 ZNF516Q92618 1163 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 MTMR12Q9C0I1 747 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 DNAJC25Q9H1X3 360 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 THAP9Q9H5L6 903 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 AGAP1Q9UPQ3 857 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 NUB1Q9Y5A7 615 aa16.81■□□□□ 0.28
SLC6A4-205ENST00000579221 KIF4AO95239 1232 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 ITGB3P05106 788 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 KRT19P08727 400 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 GTF2H1P32780 548 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 PNPLA4P41247 253 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 PDE12Q6L8Q7 609 aaKnown RBP16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 FUT10Q6P4F1 479 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 C11orf57Q6ZUT1 292 aaPredicted RBP16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 TMEM173Q86WV6 379 aaPredicted RBP16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 C1orf127Q8N9H9 656 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 HASPINQ8TF76 798 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 GDPD5Q8WTR4 605 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 BCL7CQ8WUZ0 217 aaPredicted RBP16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 GAS2L1Q99501 681 aaPredicted RBP16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 FUCA2Q9BTY2 467 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 LMCD1Q9NZU5 365 aa16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
SLC6A4-205ENST00000579221 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 PTPRJQ12913 1337 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 F8W810 466 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 C4BPAP04003 597 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms