RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ACOT2P49753 483 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 CREMQ03060 361 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 RTP2Q5QGT7 225 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 KIAA1841Q6NSI8 718 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.72■□□□□ 0.11
MKS1-207ENST00000578789 KRBA2Q6ZNG9 492 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 SCFD1Q8WVM8 642 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 B3GALT6Q96L58 329 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 ASB7Q9H672 318 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.72■□□□□ 0.11
MKS1-207ENST00000578789 FNIP2Q9P278 1114 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 FAM50BQ9Y247 325 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 DERAQ9Y315 318 aa15.72■□□□□ 0.11
MKS1-207ENST00000578789 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.71■□□□□ 0.11
MKS1-207ENST00000578789 C2CD2LO14523 706 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 KIAA0391O15091 583 aaKnown RBP15.71■□□□□ 0.11
MKS1-207ENST00000578789 TEX28O15482 410 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 XPOTO43592 962 aaKnown RBP15.71■□□□□ 0.11
MKS1-207ENST00000578789 ZNF202O95125 648 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 LDHAP00338 332 aaKnown RBP15.71■□□□□ 0.11
MKS1-207ENST00000578789 C1RP00736 705 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 ADH1AP07327 375 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 HOXB8P17481 243 aaPredicted RBP15.71■□□□□ 0.11
MKS1-207ENST00000578789 FGFR3P22607 806 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 CLCN4P51793 760 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 SPAG1Q07617 926 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 SMAD2Q15796 467 aaKnown RBP15.71■□□□□ 0.11
MKS1-207ENST00000578789 CLUL1Q15846 466 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 KMT5BQ4FZB7 885 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 FAM171A1Q5VUB5 890 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 LLGL2Q6P1M3 1020 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 ARMCX5Q6P1M9 558 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 SYCE2Q6PIF2 218 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 BRSK2Q8IWQ3 736 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 TMEM87AQ8NBN3 555 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 RIN2Q8WYP3 895 aaPredicted RBP15.71■□□□□ 0.11
MKS1-207ENST00000578789 PIK3R5Q8WYR1 880 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 CBWD1Q9BRT8 395 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 TTPALQ9BTX7 342 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 DZANK1Q9NVP4 752 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 C2CD2Q9Y426 696 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 XIRP2A4UGR9 3374 aa15.71■□□□□ 0.11
MKS1-207ENST00000578789 TRAPPC3O43617 180 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 IL18RAPO95256 599 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 NFICP08651 508 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 PRR29P0C7W0 189 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 EPCAMP16422 314 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 KLRC2P26717 231 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 DPYDQ12882 1025 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 PSMD2Q13200 908 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 SPATA1Q5VX52 437 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 JADE1Q6IE81 842 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 PDXDC1Q6P996 788 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 FMR1NBQ8N0W7 255 aaPredicted RBP15.7■□□□□ 0.1
MKS1-207ENST00000578789 KIAA0895Q8NCT3 520 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 LNX1Q8TBB1 728 aaPredicted RBP15.7■□□□□ 0.1
MKS1-207ENST00000578789 SAAL1Q96ER3 474 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 UHRF1Q96T88 793 aaPredicted RBP15.7■□□□□ 0.1
MKS1-207ENST00000578789 S1PR5Q9H228 398 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 SLC39A2Q9NP94 309 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 EXOC1Q9NV70 894 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 CHMP5Q9NZZ3 219 aa15.7■□□□□ 0.1
MKS1-207ENST00000578789 MTCL1Q9Y4B5 1905 aaKnown RBP15.7■□□□□ 0.1
MKS1-207ENST00000578789 GOLGA6L4A6NEF3 574 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 TGFB1I1O43294 461 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 EXTL3O43909 919 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 RPN1P04843 607 aaKnown RBP15.69■□□□□ 0.1
MKS1-207ENST00000578789 BRCC3P46736 316 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 SNRPFP62306 86 aaKnown RBP15.69■□□□□ 0.1
MKS1-207ENST00000578789 TMEM132DQ14C87 1099 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 PSMD5Q16401 504 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 TPRNQ4KMQ1 711 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 PRSS55Q6UWB4 352 aaPredicted RBP15.69■□□□□ 0.1
MKS1-207ENST00000578789 NT5DC4Q86YG4 428 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 GPD1LQ8N335 351 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 ZSWIM2Q8NEG5 633 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 ENGASEQ8NFI3 743 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 BEST2Q8NFU1 509 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 SUSD6Q92537 303 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 FAM212AQ96EL1 285 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 FAM213AQ9BRX8 229 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 AGPAT3Q9NRZ7 376 aa15.69■□□□□ 0.1
MKS1-207ENST00000578789 USP15Q9Y4E8 981 aaPredicted RBP15.69■□□□□ 0.1
MKS1-207ENST00000578789 TSC2P49815 1807 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 DENND4AQ7Z401 1863 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 SYN3O14994 580 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 RHOBTB3O94955 611 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 GLUD1P00367 558 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 TKTP29401 623 aaKnown RBP15.68■□□□□ 0.1
MKS1-207ENST00000578789 AARSP49588 968 aaKnown RBP eCLIP15.68■□□□□ 0.1
MKS1-207ENST00000578789 WNT7BP56706 349 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 FAM160A1Q05DH4 1040 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 STK4Q13043 487 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 SNW1Q13573 536 aaKnown RBP15.68■□□□□ 0.1
MKS1-207ENST00000578789 KANK3Q6NY19 840 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 CEP57Q86XR8 500 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 NELFCDQ8IXH7 590 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 C12orf56Q8IXR9 622 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 EFCAB13Q8IY85 973 aa15.68■□□□□ 0.1
MKS1-207ENST00000578789 TMEM130Q8N3G9 435 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms