RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 SV2BQ7L1I2 683 aa18.9■□□□□ 0.62
ABR-236ENST00000577052 GET4Q7L5D6 327 aaPredicted RBP18.9■□□□□ 0.62
ABR-236ENST00000577052 KCTD17Q8N5Z5 321 aa18.9■□□□□ 0.62
ABR-236ENST00000577052 PIGOQ8TEQ8 1089 aa18.9■□□□□ 0.62
ABR-236ENST00000577052 NFKBIZQ9BYH8 718 aa18.9■□□□□ 0.62
ABR-236ENST00000577052 PRKD2Q9BZL6 878 aa18.9■□□□□ 0.62
ABR-236ENST00000577052 ANKEF1Q9NU02 776 aa18.9■□□□□ 0.62
ABR-236ENST00000577052 ADAM28Q9UKQ2 775 aa18.9■□□□□ 0.62
ABR-236ENST00000577052 WDR87Q6ZQQ6 2873 aa18.9■□□□□ 0.62
ABR-236ENST00000577052 DNAH14Q0VDD8 3507 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 MYMKA6NI61 221 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 ADAM12O43184 909 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 DGAT1O75907 488 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 EDN1P05305 212 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 MYL1P05976 194 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 DCNP07585 359 aaKnown RBP18.89■□□□□ 0.61
ABR-236ENST00000577052 GLULP15104 373 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 NTHL1P78549 312 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 NAB2Q15742 525 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 USP41Q3LFD5 358 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 GAS2L3Q86XJ1 694 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 SMARCE1Q969G3 411 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 C7orf25Q9BPX7 421 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 CLSTN3Q9BQT9 956 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 TRIM9Q9C026 710 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 POLR3FQ9H1D9 316 aaPredicted RBP18.89■□□□□ 0.61
ABR-236ENST00000577052 PLEKHA4Q9H4M7 779 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 ZDHHC7Q9NXF8 308 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 MAN1B1Q9UKM7 699 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 DNM3Q9UQ16 869 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 USP20Q9Y2K6 914 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 NUMBLQ9Y6R0 609 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 R4GN57 208 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 OTOGLQ3ZCN5 2332 aa18.89■□□□□ 0.61
ABR-236ENST00000577052 CACNA1AO00555 2505 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 PTGESO14684 152 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 LRRN2O75325 713 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 ZMYND10O75800 440 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 C1RP00736 705 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 CCDC192P0DO97 292 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 GRIK3Q13003 919 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 TFDP1Q14186 410 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 SLC27A1Q6PCB7 646 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 SASS6Q6UVJ0 657 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 GPR65Q8IYL9 337 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 SYT2Q8N9I0 419 aaPredicted RBP18.88■□□□□ 0.61
ABR-236ENST00000577052 HASPINQ8TF76 798 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 FGF14Q92915 247 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 NACC1Q96RE7 527 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 TSPY26PQ9H489 355 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 PARP2Q9UGN5 583 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 FBXW11Q9UKB1 542 aa18.88■□□□□ 0.61
ABR-236ENST00000577052 DMXL1Q9Y485 3027 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 BIN1O00499 593 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 KLRC4O43908 158 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 KIF4AO95239 1232 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 SMC2O95347 1197 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 CYP11B2P19099 503 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 HSP90AA2PQ14568 343 aaPredicted RBP18.87■□□□□ 0.61
ABR-236ENST00000577052 STX1AQ16623 288 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 CNNM4Q6P4Q7 775 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 MAEAQ7L5Y9 396 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 GPBP1Q86WP2 473 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 LNX1Q8TBB1 728 aaPredicted RBP18.87■□□□□ 0.61
ABR-236ENST00000577052 BSNDQ8WZ55 320 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 NXPE3Q969Y0 559 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 FOXQ1Q9C009 403 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 TRIM6Q9C030 488 aaPredicted RBP18.87■□□□□ 0.61
ABR-236ENST00000577052 BHMT2Q9H2M3 363 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 PIDD1Q9HB75 910 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 SLC2A4RGQ9NR83 387 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.87■□□□□ 0.61
ABR-236ENST00000577052 DPP7Q9UHL4 492 aa18.87■□□□□ 0.61
ABR-236ENST00000577052 GPR179Q6PRD1 2367 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 ZMYM2Q9UBW7 1377 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 CASTOR2A6NHX0 329 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 STK25O00506 426 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 USO1O60763 962 aaKnown RBP18.86■□□□□ 0.61
ABR-236ENST00000577052 RPN1P04843 607 aaKnown RBP18.86■□□□□ 0.61
ABR-236ENST00000577052 BMP6P22004 513 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 ID4P47928 161 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 NLRP12P59046 1061 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 FOXK2Q01167 660 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 AMPD3Q01432 767 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 MORC3Q14149 939 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 DPCR1Q3MIW9 517 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 CDCA2Q69YH5 1023 aaPredicted RBP18.86■□□□□ 0.61
ABR-236ENST00000577052 PHLDB3Q6NSJ2 640 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 POTEHQ6S545 545 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 PARM1Q6UWI2 310 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 GRASPQ7Z6J2 395 aaPredicted RBP18.86■□□□□ 0.61
ABR-236ENST00000577052 MAML2Q8IZL2 1156 aaPredicted RBP18.86■□□□□ 0.61
ABR-236ENST00000577052 RUSC1Q9BVN2 902 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 FZD8Q9H461 694 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 PDZD7Q9H5P4 517 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 ARHGEF3Q9NR81 526 aa18.86■□□□□ 0.61
ABR-236ENST00000577052 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.86■□□□□ 0.618e-7■■■■■ 33.3
ABR-236ENST00000577052 TRIP11Q15643 1979 aa18.85■□□□□ 0.61
ABR-236ENST00000577052 TADA2AO75478 443 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms