RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 SGMS1Q86VZ5 419 aa10.32□□□□□ -0.76
TOM1L1-223ENST00000576932 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.32□□□□□ -0.76
TOM1L1-223ENST00000576932 MAP4K1Q92918 833 aa10.32□□□□□ -0.76
TOM1L1-223ENST00000576932 IFT122Q9HBG6 1241 aa10.32□□□□□ -0.76
TOM1L1-223ENST00000576932 SUCLA2Q9P2R7 463 aaPredicted RBP10.32□□□□□ -0.76
TOM1L1-223ENST00000576932 SERTAD1Q9UHV2 236 aa10.32□□□□□ -0.76
TOM1L1-223ENST00000576932 RALYQ9UKM9 306 aaKnown RBP10.32□□□□□ -0.76
TOM1L1-223ENST00000576932 DOCK6Q96HP0 2047 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 ZMYM2Q9UBW7 1377 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 ESYT2A0FGR8 921 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 ARL5CA6NH57 179 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 SHISA7A6NL88 538 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 TM4SF5O14894 197 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 MAFO75444 373 aaPredicted RBP10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 MYBP10242 640 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 HOXA11P31270 313 aaPredicted RBP10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 SMTNP53814 917 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 SIM2Q14190 667 aaPredicted RBP10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 UGCGQ16739 394 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 UVSSAQ2YD98 709 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 PRR16Q569H4 304 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 PPM1LQ5SGD2 360 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 UBXN11Q5T124 520 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 FUT10Q6P4F1 479 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 RHPN2Q8IUC4 686 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 LENG9Q96B70 501 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 CCDC51Q96ER9 411 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 RAB6BQ9NRW1 208 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 KIAA1024Q9UPX6 916 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 RALGAPA1Q6GYQ0 2036 aa10.31□□□□□ -0.76
TOM1L1-223ENST00000576932 SFI1A8K8P3 1242 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 TMEM229AB2RXF0 380 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 PAPSS2O95340 614 aaPredicted RBP10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 C8AP07357 584 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 ITGA4P13612 1032 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 LPAL2Q16609 132 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 MTERF2Q49AM1 385 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 JAKMIP3Q5VZ66 844 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 SYNE3Q6ZMZ3 975 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 PRR23BQ6ZRT6 265 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 MICU3Q86XE3 530 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 NPAS3Q8IXF0 933 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 EXOC8Q8IYI6 725 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 KDF1Q8NAX2 398 aaPredicted RBP10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 SMG8Q8ND04 991 aaKnown RBP10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 ST13P5Q8NFI4 369 aaPredicted RBP10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 ITFG1Q8TB96 612 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 NLRP4Q96MN2 994 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 KXD1Q9BQD3 176 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 GPR62Q9BZJ7 368 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 ZMYND12Q9H0C1 365 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 RWDD1Q9H446 243 aaPredicted RBP10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 TRPV5Q9NQA5 729 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 AVENQ9NQS1 362 aaPredicted RBP10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 HEBP1Q9NRV9 189 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 GDE1Q9NZC3 331 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 ADAM28Q9UKQ2 775 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 PPME1Q9Y570 386 aa10.3□□□□□ -0.76
TOM1L1-223ENST00000576932 SF3B1O75533 1304 aaKnown RBP eCLIP10.3□□□□□ -0.769e-6■■■■■ 68.9
TOM1L1-223ENST00000576932 TMEM8BA6NDV4 472 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 A6NJY4 79 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 SGSM2O43147 1006 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 STBD1O95210 358 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 CHMLP26374 656 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 AXLP30530 894 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 CXCL12P48061 93 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 RNF144AP50876 292 aaPredicted RBP10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 NTHL1P78549 312 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 CENPCQ03188 943 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 TMEM164Q5U3C3 297 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 PDXDC1Q6P996 788 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 REXO1Q8N1G1 1221 aaKnown RBP10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 EXOC6Q8TAG9 804 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 PIK3R5Q8WYR1 880 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 ELSPBP1Q96BH3 223 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 GAD1Q99259 594 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 TEKT3Q9BXF9 490 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 ZMIZ1Q9ULJ6 1067 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 GIT1Q9Y2X7 761 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 IPPQ9Y573 584 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 COL4A3BPQ9Y5P4 624 aa10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 RBM8AQ9Y5S9 174 aaKnown RBP10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 TDRD15B5MCY1 1934 aaKnown RBP10.29□□□□□ -0.76
TOM1L1-223ENST00000576932 TTLL8A6PVC2 850 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 SOBPA7XYQ1 873 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 CDK2AP1O14519 115 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 MSH4O15457 936 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 GAS7O60861 476 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 IL2RAP01589 272 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 HOXA6P31267 233 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 MLH1P40692 756 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 RCAN1P53805 252 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 MLLT6P55198 1093 aaPredicted RBP10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 PABPC1LQ4VXU2 614 aaKnown RBP10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 LRCH2Q5VUJ6 765 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 NOTUMQ6P988 496 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 C1orf228Q6PIY5 440 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 APOA5Q6Q788 366 aa10.28□□□□□ -0.76
TOM1L1-223ENST00000576932 B3GNT9Q6UX72 402 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms