RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 GUCY2FP51841 1108 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 AP3M2P53677 418 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 HTRA4P83105 476 aaPredicted RBP9.23□□□□□ -0.93
PRPF8-213ENST00000576407 RNASELQ05823 741 aaKnown RBP9.23□□□□□ -0.93
PRPF8-213ENST00000576407 SOX4Q06945 474 aaPredicted RBP9.23□□□□□ -0.93
PRPF8-213ENST00000576407 SLC20A2Q08357 652 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 MAN2A1Q16706 1144 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 DUOXA2Q1HG44 320 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 MIIPQ5JXC2 388 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 FAM109BQ6ICB4 259 aaPredicted RBP9.23□□□□□ -0.93
PRPF8-213ENST00000576407 ZNF280BQ86YH2 543 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 LRRC43Q8N309 656 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 TMEM130Q8N3G9 435 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 ANKRD20A12PQ8NF67 263 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 CACTINQ8WUQ7 758 aaKnown RBP9.23□□□□□ -0.93
PRPF8-213ENST00000576407 RSPH1Q8WYR4 309 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 YME1L1Q96TA2 773 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 MRPL9Q9BYD2 267 aaKnown RBP9.23□□□□□ -0.93
PRPF8-213ENST00000576407 MTMR12Q9C0I1 747 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 MMRN2Q9H8L6 949 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 GOLGA2P5Q9HBQ8 144 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 SLC38A7Q9NVC3 462 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 DPP3Q9NY33 737 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 TAB2Q9NYJ8 693 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 HCSTQ9UBK5 93 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 TUBGCP4Q9UGJ1 667 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 LIMA1Q9UHB6 759 aaKnown RBP9.23□□□□□ -0.93
PRPF8-213ENST00000576407 UBQLN1Q9UMX0 589 aaKnown RBP9.23□□□□□ -0.93
PRPF8-213ENST00000576407 INSL6Q9Y581 213 aa9.23□□□□□ -0.93
PRPF8-213ENST00000576407 FNDC1Q4ZHG4 1894 aaPredicted RBP9.23□□□□□ -0.93
PRPF8-213ENST00000576407 LRRC10BA6NIK2 292 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 GRXCR1A8MXD5 290 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 XPOTO43592 962 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 TLL1O43897 1013 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 B4GALT3O60512 393 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 DDHD2O94830 711 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 TNNC2P02585 160 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 AFPP02771 609 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 C4BPAP04003 597 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 CYP3A5P20815 502 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 GTF2H1P32780 548 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 FMO5P49326 533 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 RABGGTBP53611 331 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 COPB1P53618 953 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 DSC1Q08554 894 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 KCNH2Q12809 1159 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 TUSC3Q13454 348 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 BIRC3Q13489 604 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 BTG3Q14201 252 aaPredicted RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 ZACNQ401N2 412 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 CBWD6Q4V339 395 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 VWA3BQ502W6 1294 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 CBWD3Q5JTY5 395 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 CBWD5Q5RIA9 395 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 TDRD10Q5VZ19 366 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 SCARA3Q6AZY7 606 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 CHRDL2Q6WN34 429 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 C15orf39Q6ZRI6 1047 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 SV2AQ7L0J3 742 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 APTXQ7Z2E3 356 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 TRAPPC11Q7Z392 1133 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 CMTR2Q8IYT2 770 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 TDHQ8IZJ6 230 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 C1orf127Q8N9H9 656 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 BEST2Q8NFU1 509 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 CXorf38Q8TB03 319 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 IPO4Q8TEX9 1081 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 ANKRD36BP1Q96IX9 119 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 FAM193BQ96PV7 902 aaPredicted RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 RAD9AQ99638 391 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 VPS16Q9H269 839 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 PRO3102Q9H379 93 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 NDST4Q9H3R1 872 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 NRDE2Q9H7Z3 1164 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 TMEM8AQ9HCN3 771 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 CACNG4Q9UBN1 327 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 DNAJB4Q9UDY4 337 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 SIX4Q9UIU6 781 aa9.22□□□□□ -0.93
PRPF8-213ENST00000576407 TDRD15B5MCY1 1934 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 RANBP2P49792 3224 aaKnown RBP9.22□□□□□ -0.93
PRPF8-213ENST00000576407 LCHNA4D1U4 455 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 CASTOR2A6NHX0 329 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 PES1O00541 588 aaKnown RBP9.21□□□□□ -0.94
PRPF8-213ENST00000576407 ZC3H11AO75152 810 aaKnown RBP eCLIP9.21□□□□□ -0.94
PRPF8-213ENST00000576407 PHACTR2O75167 634 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 VNN1O95497 513 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 SERPINC1P01008 464 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 CST3P01034 146 aaPredicted RBP9.21□□□□□ -0.94
PRPF8-213ENST00000576407 ITGB3P05106 788 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 MYOGP15173 224 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 LRPAP1P30533 357 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 MXI1P50539 228 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 CLCNKBP51801 687 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 FANCCQ00597 558 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 MYL7Q01449 175 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 UPP1Q16831 310 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 C9orf57Q5W0N0 161 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 KRT39Q6A163 491 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 COLGALT2Q8IYK4 626 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 SP7Q8TDD2 431 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms