RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CLCN4P51793 760 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 ZBTB6Q15916 424 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 SYCE2Q6PIF2 218 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.55■■□□□ 1.68
SNF8-217ENST00000576353 FAM212AQ96EL1 285 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 NECAB3Q96P71 396 aaPredicted RBP25.55■■□□□ 1.68
SNF8-217ENST00000576353 ASB7Q9H672 318 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 PRKAG3Q9UGI9 489 aa25.55■■□□□ 1.68
SNF8-217ENST00000576353 C1RP00736 705 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 SPAG1Q07617 926 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 EHHADHQ08426 723 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 RTP2Q5QGT7 225 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 CD300LGQ6UXG3 332 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 GRAMD1CQ8IYS0 662 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 ZNF507Q8TCN5 953 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 PIK3R5Q8WYR1 880 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 S1PR5Q9H228 398 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 DPP7Q9UHL4 492 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 CIZ1Q9ULV3 898 aaPredicted RBP25.54■■□□□ 1.68
SNF8-217ENST00000576353 DERAQ9Y315 318 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 USP15Q9Y4E8 981 aaPredicted RBP25.54■■□□□ 1.68
SNF8-217ENST00000576353 NUB1Q9Y5A7 615 aa25.54■■□□□ 1.68
SNF8-217ENST00000576353 TTC28Q96AY4 2481 aa25.53■■□□□ 1.68
SNF8-217ENST00000576353 GOLGA6L4A6NEF3 574 aa25.53■■□□□ 1.68
SNF8-217ENST00000576353 TNFRSF10AO00220 468 aa25.53■■□□□ 1.68
SNF8-217ENST00000576353 FGFR3P22607 806 aa25.53■■□□□ 1.68
SNF8-217ENST00000576353 ELMSAN1Q6PJG2 1045 aa25.53■■□□□ 1.68
SNF8-217ENST00000576353 EPM2AIP1Q7L775 607 aaPredicted RBP25.53■■□□□ 1.68
SNF8-217ENST00000576353 C3orf58Q8NDZ4 430 aa25.53■■□□□ 1.68
SNF8-217ENST00000576353 GLIS3Q8NEA6 775 aa25.53■■□□□ 1.68
SNF8-217ENST00000576353 FBXL18Q96ME1 805 aa25.53■■□□□ 1.68
SNF8-217ENST00000576353 TUBGCP4Q9UGJ1 667 aa25.53■■□□□ 1.68
SNF8-217ENST00000576353 KIAA0391O15091 583 aaKnown RBP25.52■■□□□ 1.68
SNF8-217ENST00000576353 GLUD1P00367 558 aa25.52■■□□□ 1.68
SNF8-217ENST00000576353 IGFBP6P24592 240 aaPredicted RBP25.52■■□□□ 1.68
SNF8-217ENST00000576353 LRPAP1P30533 357 aa25.52■■□□□ 1.68
SNF8-217ENST00000576353 ITIH3Q06033 890 aa25.52■■□□□ 1.68
SNF8-217ENST00000576353 JADE1Q6IE81 842 aa25.52■■□□□ 1.68
SNF8-217ENST00000576353 CES5AQ6NT32 575 aa25.52■■□□□ 1.68
SNF8-217ENST00000576353 PRSS55Q6UWB4 352 aaPredicted RBP25.52■■□□□ 1.68
SNF8-217ENST00000576353 CRELD2Q6UXH1 353 aaPredicted RBP25.52■■□□□ 1.68
SNF8-217ENST00000576353 BEST2Q8NFU1 509 aa25.52■■□□□ 1.68
SNF8-217ENST00000576353 FAM213AQ9BRX8 229 aa25.52■■□□□ 1.68
SNF8-217ENST00000576353 VCANP13611 3396 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 IL18RAPO95256 599 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 BRCC3P46736 316 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 TMEM132DQ14C87 1099 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 PSMD5Q16401 504 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 SPATA1Q5VX52 437 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 ARMCX5Q6P1M9 558 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 ADHFE1Q8IWW8 467 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 LNX1Q8TBB1 728 aaPredicted RBP25.51■■□□□ 1.67
SNF8-217ENST00000576353 SUSD6Q92537 303 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 CCDC34Q96HJ3 373 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 POP1Q99575 1024 aaKnown RBP25.51■■□□□ 1.67
SNF8-217ENST00000576353 ADAM7Q9H2U9 754 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 GOLPH3LQ9H4A5 285 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 EXOC1Q9NV70 894 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 C2CD2Q9Y426 696 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 UBE4BO95155 1302 aa25.51■■□□□ 1.67
SNF8-217ENST00000576353 SPDYE4A6NLX3 237 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 EXTL3O43909 919 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 ZNF202O95125 648 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 ANP32AP39687 249 aaKnown RBP25.5■■□□□ 1.67
SNF8-217ENST00000576353 SNRPFP62306 86 aaKnown RBP25.5■■□□□ 1.67
SNF8-217ENST00000576353 PSMD2Q13200 908 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 KRBA2Q6ZNG9 492 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 ANKS3Q6ZW76 656 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 CUL9Q8IWT3 2517 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 CBWD1Q9BRT8 395 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 APOL5Q9BWW9 433 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 SFXN1Q9H9B4 322 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 SLC39A2Q9NP94 309 aa25.5■■□□□ 1.67
SNF8-217ENST00000576353 CITO14578 2027 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 TCF20Q9UGU0 1960 aaKnown RBP25.49■■□□□ 1.67
SNF8-217ENST00000576353 I3L4J1 428 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 SYN3O14994 580 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 KLRC4O43908 158 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 RPL17P18621 184 aaKnown RBP25.49■■□□□ 1.67
SNF8-217ENST00000576353 TKTP29401 623 aaKnown RBP25.49■■□□□ 1.67
SNF8-217ENST00000576353 MCM4P33991 863 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 HOXD13P35453 343 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 PALB2Q86YC2 1186 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 NT5DC4Q86YG4 428 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 GJD3Q8N144 294 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 HDAC7Q8WUI4 952 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 SCFD1Q8WVM8 642 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 SAAL1Q96ER3 474 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 PCIF1Q9H4Z3 704 aa25.49■■□□□ 1.67
SNF8-217ENST00000576353 NFICP08651 508 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 PAX3P23760 479 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 ZP2Q05996 745 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 CBX2Q14781 532 aaPredicted RBP25.48■■□□□ 1.67
SNF8-217ENST00000576353 RARS2Q5T160 578 aaKnown RBP25.48■■□□□ 1.67
SNF8-217ENST00000576353 KANK3Q6NY19 840 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 HS2ST1Q7LGA3 356 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 GLYCTKQ8IVS8 523 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 GPD1LQ8N335 351 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 C12orf76Q8N812 135 aaPredicted RBP25.48■■□□□ 1.67
SNF8-217ENST00000576353 CCDC47Q96A33 483 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms