RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 TNNC2P02585 160 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 CLCNKBP51801 687 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 VAMP7P51809 220 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 KRT17Q04695 432 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 ENPEPQ07075 957 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 UPP1Q16831 310 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 DUOXA2Q1HG44 320 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 KLHL23Q8NBE8 558 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 PARD3BQ8TEW8 1205 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 RABGGTAQ92696 567 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 TMEM169Q96HH4 297 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 PAAF1Q9BRP4 392 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 NAT10Q9H0A0 1025 aaKnown RBP15.13■□□□□ 0.01
RPAIN-217ENST00000575711 DNAJC25Q9H1X3 360 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 TTYH1Q9H313 450 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-217ENST00000575711 INTS13Q9NVM9 706 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 DPP3Q9NY33 737 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 CACNG4Q9UBN1 327 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 TRIOBPQ9H2D6 2365 aa15.13■□□□□ 0.01
RPAIN-217ENST00000575711 LRRIQ3A6PVS8 624 aaPredicted RBP15.12■□□□□ 0.01
RPAIN-217ENST00000575711 TADA2AO75478 443 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 B3GAT3O94766 335 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 LRPAP1P30533 357 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 GUCY2FP51841 1108 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 AP3M2P53677 418 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 PLCB3Q01970 1234 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 BFSP1Q12934 665 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 GPM6BQ13491 265 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 CCDC40Q4G0X9 1142 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 LMBRD2Q68DH5 695 aaPredicted RBP15.12■□□□□ 0.01
RPAIN-217ENST00000575711 DCLRE1AQ6PJP8 1040 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 C11orf57Q6ZUT1 292 aaPredicted RBP15.12■□□□□ 0.01
RPAIN-217ENST00000575711 FRMD5Q7Z6J6 570 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 ENOX1Q8TC92 643 aaKnown RBP15.12■□□□□ 0.01
RPAIN-217ENST00000575711 PLEKHO2Q8TD55 490 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 IGSF21Q96ID5 467 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 MED15Q96RN5 788 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 POP1Q99575 1024 aaKnown RBP15.12■□□□□ 0.01
RPAIN-217ENST00000575711 MTMR12Q9C0I1 747 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 METTL14Q9HCE5 456 aaKnown RBP15.12■□□□□ 0.01
RPAIN-217ENST00000575711 MARCH5Q9NX47 278 aa15.12■□□□□ 0.01
RPAIN-217ENST00000575711 ARMCX3Q9UH62 379 aaPredicted RBP15.12■□□□□ 0.01
RPAIN-217ENST00000575711 PUF60Q9UHX1 559 aaKnown RBP15.12■□□□□ 0.01
RPAIN-217ENST00000575711 R3HCC1Q9Y3T6 440 aaKnown RBP15.12■□□□□ 0.01
RPAIN-217ENST00000575711 TDRD15B5MCY1 1934 aaKnown RBP15.11■□□□□ 0.01
RPAIN-217ENST00000575711 H3BNC9 293 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 TMEM189-UBE2V1I3L0A0 370 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 IKBKBO14920 756 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 KIF4AO95239 1232 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 ITGB1P05556 798 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 FXR1P51114 621 aaKnown RBP eCLIP15.11■□□□□ 0.01
RPAIN-217ENST00000575711 DLG4P78352 724 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 CLDN10P78369 228 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 UBE3AQ05086 875 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 ANO6Q4KMQ2 910 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 DCAF17Q5H9S7 520 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-217ENST00000575711 TMEM173Q86WV6 379 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-217ENST00000575711 FAM114A1Q8IWE2 563 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 OR5B17Q8NGF7 314 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 HASPINQ8TF76 798 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 BORCS6Q96GS4 357 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 FUCA2Q9BTY2 467 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 STK39Q9UEW8 545 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 ADAM28Q9UKQ2 775 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 ITGA11Q9UKX5 1188 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 NUB1Q9Y5A7 615 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 PTPRJQ12913 1337 aa15.11■□□□□ 0.01
RPAIN-217ENST00000575711 EPOPA6NHQ4 379 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 ITGB3P05106 788 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 KRT19P08727 400 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 TRIM49P0CI25 452 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 TRIM49CP0CI26 452 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 TCERG1LQ5VWI1 586 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 C9orf57Q5W0N0 161 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 TRAPPC11Q7Z392 1133 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 TMEM130Q8N3G9 435 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 C1orf127Q8N9H9 656 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 GDPD5Q8WTR4 605 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 BCL7CQ8WUZ0 217 aaPredicted RBP15.1■□□□□ 0.01
RPAIN-217ENST00000575711 FAM84AQ96KN4 292 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 FAM161BQ96MY7 647 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 GZF1Q9H116 711 aaPredicted RBP15.1■□□□□ 0.01
RPAIN-217ENST00000575711 THAP9Q9H5L6 903 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 ALG13Q9NP73 1137 aaKnown RBP15.1■□□□□ 0.01
RPAIN-217ENST00000575711 LZTS1Q9Y250 596 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 NFE2L3Q9Y4A8 694 aa15.1■□□□□ 0.01
RPAIN-217ENST00000575711 KIAA1671Q9BY89 1806 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 ANO9A1A5B4 782 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 F8W810 466 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 PIRO00625 290 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 STX10O60499 249 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 PHACTR2O75167 634 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 POLR2BP30876 1174 aaKnown RBP15.09■□□□□ 0.01
RPAIN-217ENST00000575711 GTF2H1P32780 548 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 PNPLA4P41247 253 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 MARSP56192 900 aaKnown RBP15.09■□□□□ 0.01
RPAIN-217ENST00000575711 RBP5P82980 135 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 MYL5Q02045 173 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 ELAVL2Q12926 359 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms