RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 IRF7Q92985 503 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 TCEAL4Q96EI5 215 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 CCDC43Q96MW1 224 aaKnown RBP10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 UROC1Q96N76 676 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 ASB16Q96NS5 453 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 ADPGKQ9BRR6 497 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 TRMT61BQ9BVS5 477 aaKnown RBP10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 C2orf40Q9H1Z8 148 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 BRD9Q9H8M2 597 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 LMAN1LQ9HAT1 526 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 ZNF334Q9HCZ1 680 aaPredicted RBP10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 RAB23Q9ULC3 237 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 GDAQ9Y2T3 454 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 LAMA1P25391 3075 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 USP24Q9UPU5 2620 aa10.99□□□□□ -0.65
CALCOCO2-227ENST00000575560 WDR27A2RRH5 827 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 I3L4J1 428 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 WNT7AO00755 349 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 ZNF197O14709 1029 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 HRO43593 1189 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 CTDNEP1O95476 244 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 SEC24AO95486 1093 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 LRG1P02750 347 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 PRKCBP05771 671 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 CHRNB1P11230 501 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 FDPSP14324 419 aaKnown RBP10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 PSMC3P17980 439 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 NAMPTP43490 491 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 CCR3P51677 355 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 MLLT6P55198 1093 aaPredicted RBP10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 ROR1Q01973 937 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 MRPL58Q14197 206 aaKnown RBP10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 GAS6Q14393 721 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 GRM2Q14416 872 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 LPAL2Q16609 132 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 ST3GAL2Q16842 350 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 DCAF4L1Q3SXM0 396 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 XKR4Q5GH76 650 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 PPM1JQ5JR12 505 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 GLRA4Q5JXX5 417 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 VITQ6UXI7 678 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 ALKAL1Q6UXT8 129 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 CATSPER3Q86XQ3 398 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 FAM3CQ92520 227 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 ZSWIM3Q96MP5 696 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 CORO1BQ9BR76 489 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 TRPV4Q9HBA0 871 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 GOLGA2P5Q9HBQ8 144 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 TUFT1Q9NNX1 390 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 SEMA4GQ9NTN9 838 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 PDRG1Q9NUG6 133 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 FRYQ5TBA9 3013 aa10.98□□□□□ -0.65
CALCOCO2-227ENST00000575560 SMIM28A0A1B0GU29 152 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 ARNTLO00327 626 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 PRRG1O14668 218 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 PFKFB2O60825 505 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 MOSPD3O75425 235 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 MED24O75448 989 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 CYP11B2P19099 503 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 ELF1P32519 619 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 KRT2P35908 639 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 BRCC3P46736 316 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 CXCL12P48061 93 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 CSRP2Q16527 193 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 TMEM132AQ24JP5 1023 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 NT5DC1Q5TFE4 455 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 SMARCD2Q92925 531 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 NACC1Q96RE7 527 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 ORC3Q9UBD5 711 aaPredicted RBP10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 PIAS3Q9Y6X2 628 aa10.97□□□□□ -0.65
CALCOCO2-227ENST00000575560 SYN3O14994 580 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 GDF9O60383 454 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 NEMFO60524 1076 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 PAPSS2O95340 614 aaPredicted RBP10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 GDI1P31150 447 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 CNR2P34972 360 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 VIPR2P41587 438 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 EFNA5P52803 228 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 EPHA5P54756 1037 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 SATB1Q01826 763 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 SOX4Q06945 474 aaPredicted RBP10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 DMWDQ09019 674 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 SIM2Q14190 667 aaPredicted RBP10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 CYP4A22Q5TCH4 519 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 TPGS2Q68CL5 300 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 PADI6Q6TGC4 694 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 PRR23CQ6ZRP0 262 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 PRR23BQ6ZRT6 265 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 PDZD4Q76G19 769 aaPredicted RBP10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 MFSD6LQ8IWD5 586 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 HS6ST3Q8IZP7 471 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 SPEM1Q8N4L4 309 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 DEPTORQ8TB45 409 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 DEPDC1BQ8WUY9 529 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 WASF1Q92558 559 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 POLR3CQ9BUI4 534 aaPredicted RBP10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 TMEM60Q9H2L4 133 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 CYP4F11Q9HBI6 524 aa10.96□□□□□ -0.65
CALCOCO2-227ENST00000575560 CEP72Q9P209 647 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms